Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 2e-14 >seq5 Length=3107351 Score = 96.9 bits (106), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || || || || || || || || | || ||||||| || || Sbjct 1010006 CGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTG 1010065 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | || || || |||||||| || || || ||||| || ||||| || ||||| || Sbjct 1010066 CGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCC 1010125 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| ||||| || || || || | | | ||| ||| Sbjct 1010126 TCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGG 1010185 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||||||||| ||||| ||||| Sbjct 1010186 GTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTG 1010223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178470787516