Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 3e-35
seq1 86.0 7e-12
>seq2
Length=6127077
Score = 163 bits (180), Expect = 3e-35
Identities = 597/921 (65%), Gaps = 23/921 (2%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAACGGCTCGATGGCATCCTCA 75203
|||||||| |||| || || ||| | || || |||| ||||||||||| ||
Sbjct 2154044 TACTTTGGGTTCAAGACGCTCGAGCGGTCATACCTCCTCAA--GCTCGATGGCAAGATCG 2153987
Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263
| || || ||| ||||| | ||||| ||||| | |||||| || || || | |
Sbjct 2153986 TCGAGCGGCCCCAGCACATGATTATGCGTGTCGCCGTGGGCATCTGGGGAGACAACGTCG 2153927
Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACC 75321
| |||| | ||||| ||| || ||||| ||||| | | | | ||||| | ||
Sbjct 2153926 AGCGTGTCATTGAGACCTACAACCTCATGTCGTCCAAGTTCTTTACC--CACGCCTCCCC 2153869
Query 75322 AACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381
|| |||||||| || ||||| || ||||| | || |||||||||| ||| |
Sbjct 2153868 CACTCTCTTCAACGCCGGTACTCCTCAGGCGCAGCTCTCTTCTTGCTTCCTTGTCGATAT 2153809
Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCA 75439
||||| ||| || | || ||||| | || || | | | | ||||| | |||||
Sbjct 2153808 GAAGGATGACAGCATTGAGGGCATCTACGATACCCTCAAG-ACT-TGCGCCATGATCTCC 2153751
Query 75440 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 75499
||| ||| || || ||||| | || |||| | | |||| ||| ||
Sbjct 2153750 AAGATGGCAGGTGGCATTGGCCTCAACGTCCACCGCATTCGCGCCACCGGTTCTTACATC 2153691
Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559
|| || || ||| || | ||||| || || ||||| ||||| || ||| |||
Sbjct 2153690 GCCGGAACCAACGGTACCTCGAACGGTATCATCCCCATGCTCCGCGTCTTCAACAACACC 2153631
Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616
|| || ||||| |||| | ||| ||| || || | || |||| ||||
Sbjct 2153630 GCCCGATATGTCGATCAGGGCGGGAACAAGCGCCCTGGCGCCTTTGCCATCTATCTGGAG 2153571
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|| |||||||| ||| || | || ||||| || | || || || || | || |||
Sbjct 2153570 CCGTGGCATGCTGATGTCTTTGAATTCCTGGACCTCCGCAAGAATCACGGCAAGGAGGAG 2153511
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
||| | |||||||| |||| ||||| || || || ||||||||||| ||
Sbjct 2153510 ATTCGTGCCCGCGATCTCTTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGAGTG 2153451
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GC 75795
||| || ||| | ||| |||| | || || || || || || || ||||| ||
Sbjct 2153450 GAGAAGAATGGCGATTGGACTCTGATGTGCCCCAACGAGTGTCCCGGCCTTGCCGACTGC 2153391
Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAG--CCAAT 75853
||| || |||||||||||||| ||| ||||| |||| ||||| | | | |
Sbjct 2153390 TATGGC-GATGAGTTTGAAGCCCTGTACGAGAAGTACGAAGCTGAGGGCCGCGGTCGCAA 2153332
Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912
| ||| | || | | || | | ||| | || || ||| | | ||||| ||||| ||
Sbjct 2153331 GACACT---CAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCGCAGACCGAGACGGG 2153275
Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972
| || | ||||| ||||||||| || ||| ||||| ||||| ||||| |||||
Sbjct 2153274 GAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGG 2153215
Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032
|| || | ||| || || ||||| || ||| | |||||| | ||||||
Sbjct 2153214 CACCATTCGCAACTCCAACCTCTGCACCGAGATTGTCGAGTACTGCGCGCCTGATGAGGT 2153155
Query 76033 GGCTGTTTGCAATTTGGCATC 76053
||||||||||| ||||| ||
Sbjct 2153154 CGCTGTTTGCAACTTGGCCTC 2153134
>seq1
Length=7551078
Score = 86.0 bits (94), Expect = 7e-12
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 27835 TCCTGCACATCGGGTGTTTCACAGC-GCTCAAGGACAAGTTGTGCGATGCGATCCCCTTT 27893
||||| || |||||||| || | | |||| ||||| || || ||||| || || || |
Sbjct 4924043 TCCTGGACCTCGGGTGTG-CAGATCCGCTCGAGGACGAGCTGGGCGATCCGGTCGCCCTC 4924101
Query 27894 CTTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATA 27953
||| ||||||||||| |||| |||| |||||||| | || ||||| | || ||
Sbjct 4924102 CTTGACCTCAAAGTCGCTGTCGGCGTGGTTGAAGAGGAGAACCTTGACCTGGCCGCGGTA 4924161
Query 27954 GTCGGGATCAATAACACCCGCACC 27977
||||| ||||| |||||||| ||
Sbjct 4924162 GTCGGCGTCAATCACACCCGCGCC 4924185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569473228960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |