Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 107 6e-18 seq7 91.5 4e-13 >seq2 Length=6127077 Score = 107 bits (118), Expect = 6e-18 Identities = 403/629 (64%), Gaps = 5/629 (1%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| ||| || |||||||| ||| ||||| || | |||||||| || ||||||| Sbjct 2153168 CGCAGTACTCGACAATCTCGGTGCAGAGGTTGGAGTTGCGAATGGTGCCCAAGTTCTTCT 2153227 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || | ||| || ||||||||| || ||| | ||| | || ||||| ||| Sbjct 2153228 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCT 2153287 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || |||||| | | || || | | |||| | ||| | Sbjct 2153288 GCGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGAGTGTCTTGCGACCGCGGCCCT 2153347 Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 | | || || ||| ||||| | | | || || || || || || || || | Sbjct 2153348 CAGCTTCGTACTTCTCGTACAGGGCTTCAAACTCATCGCCATAGCAGTCGGCAAGGCCGG 2153407 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 | |||| | |||||| | ||| | |||| ||| || |||| ||| || | Sbjct 2153408 GACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGA 2153467 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 ||| ||| | || ||| || || | || |||||| | |||||||| Sbjct 2153468 GATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCGTGAT 2153527 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || || || | |||||| | ||||| ||| ||||||||||| || |||| Sbjct 2153528 TCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATGGCAA 2153587 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| | |||| || |||||||| ||||| || || || || |||||||| | Sbjct 2153588 AGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAGACGC 2153647 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || || ||||| || || || || ||||||||| || | ||||| | | Sbjct 2153648 GGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTGG 2153707 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCAT 156221 ||||| || | | || ||||| ||||||| |||| || || || ||||| Sbjct 2153708 CGCGAATGCGGTGGACGTTGAGGCCAATGCCACCTG-CCATCTTGGAGATCATGGCGCAA 2153766 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAAT 156250 ||| | |||| | | || || ||||| Sbjct 2153767 GTCTTGAGGGTATCGTAGATGCCCTCAAT 2153795 >seq7 Length=2136105 Score = 91.5 bits (100), Expect = 4e-13 Identities = 198/294 (67%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| ||||| | ||| || || || || || || | || || ||||| Sbjct 796078 TCTTCCAAGGCCTTGACAAGACGCCGTTGGATGTAGCCCGTCTCGGCGGTCTTGACAGCG 796019 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 |||||||| | ||| | | |||| |||| || |||||||| | ||| ||| ||| | Sbjct 796018 GTATCAATCAAACCTTCTCTACCAGCCATGGCGTGGAAGAAGAACTCGGTCGG-CGTCAA 795960 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | | ||| |||| || || || || |||||||| || | |||| |||||| Sbjct 795959 GCCACGGAGATACGAGTTCTCCACAAACCCTCGGGCCTCGGGAGAGTAGTCGTCCTTGGT 795900 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 |||||| ||||| || | | | |||| | || || |||||||| || ||| | || Sbjct 795899 AAAGTGAGGCAGTGTGCGATATTTGAAGCCAAAAGGAATGCGCTTTCCTTCGACGATTTG 795840 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||| || | | | ||||||| || || || | | ||||||||||| Sbjct 795839 CTGGCCGACAAGGGCAGTCATCTGGGAGATGTTGATCGAAGATCCCTTGGAGCC 795786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729