Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 188 6e-43
seq1 113 4e-20
seq5 100 3e-16
>seq2
Length=6127077
Score = 188 bits (208), Expect = 6e-43
Identities = 983/1541 (64%), Gaps = 76/1541 (5%)
Strand=Plus/Plus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | ||| || |||||||| |||| || || || ||| |||||| ||| | ||
Sbjct 2152560 GTTGACGACTTGGAATTCACCAGCCAGCACGCGTCGTTGGTAGATGTTGGACGTGTACGG 2152619
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | ||||||||||| || ||||| | |||| | || || ||||| || |
Sbjct 2152620 CTCGAAGCACTCGTTGTTTCCGAGGATCTGGGACGTGCTTGCCGTGGGCATAGGAGCGAG 2152679
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
|| ||| ||||||| ||| || |||||||| | |||| |||| |||||||||
Sbjct 2152680 CAGCAGACTGTTCCGTACACCATGCTGCTTGATTTGCGCCTTCAGCGTGTCCCAGTCCCA 2152739
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740
| ||| || || ||||||||| ||||| || | | |||| || | |||
Sbjct 2152740 GAGGTCGGAGGGCTTGACGTTCCACATGTCGTATTGAAGCTCTCCC-----TGGGAGACA 2152794
Query 138741 G-----CCTTCGTACGAATCGTATA----CACCAAACTCTTGCGCCAACTCGTTGCTCGC 138791
| || ||||| | ||| || | | || |||| || | ||| || ||
Sbjct 2152795 GGCGAACCCTCGTAGG--TCGAGTAAGGGCCCTCCAC-CTTG-GCGAGCTCCATGGAGGC 2152850
Query 138792 CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGC 138851
||| || ||| | | |||||| || ||| ||||||| || ||| || |||||||
Sbjct 2152851 CTCAAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCGGG 2152910
Query 138852 GCTCTCGTACGGCATGCGGAGCATCG-TGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910
|||| | ||||| || || | || ||||||||| || ||||| || || || || |
Sbjct 2152911 AGACTCGAAGGGCATACGAAG-AGCGAGGAACGCGTCCGCAAGCCCCTGGACACCGACGC 2152969
Query 138911 CGACAGGGCGATGGCGCAGATTTGACGCTTT----TGCGGCTTCGATAGGATAATAGTTT 138966
| | ||||| || |||| || ||| | ||| | ||||| || |||| |||
Sbjct 2152970 CAATCGGGCGGTGACGCA----TGTTGCTGTTCCGTGCCTCCTCGATGGGGTAATGGTTG 2153025
Query 138967 ACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TC 139025
||||||| ||| |||| | || |||||||| ||||| || | | | | | | ||
Sbjct 2153026 ACATCGACGATCCTGTTCAGGTTCCGCACGACAACCTTGGT-GACCTCGTGGAGCTTCTC 2153084
Query 139026 AAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGA 139085
||| ||| | | | || |||| || ||| || || | | | || ||
Sbjct 2153085 AAAGTCGAA---GACACCCTTGTTGTAATCGATGT-----AAGAAGGCAGCGC-AAGGGA 2153135
Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145
||| | |||||| || || || || || || ||| ||| |||||||| |||| || |
Sbjct 2153136 GGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGCAGTACTCGACAATCTCGGTGCAGAG 2153195
Query 139146 ATTACTACACTTG---ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATC 139202
| | | ||| || || || || || | || ||||| || ||||| || |||
Sbjct 2153196 GT---TGGAGTTGCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATC 2153252
Query 139203 TTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA 139262
||||| ||||| | || | || || || || | ||| | ||| | | |
Sbjct 2153253 CTTGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCTGCGCCTCGAGGATGGCGTACCAGAG 2153312
Query 139263 GTCCCTAGCTT---GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAG 139319
| | ||| | || | | || || | | || |||||||| ||||| ||
Sbjct 2153313 CTTCTGAGCCTTGAGTGTCTTGCGACCG---CGGCCCTCAGCTTCGTACTTCTCGTACAG 2153369
Query 139320 TTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAG 139379
| || || || || ||| ||| | ||| || |||||| || || ||||| ||
Sbjct 2153370 GGCTTCAAACTCATCGCCATAGCAGTCGGCAAGGCCGGGACACTCGTTGGGGCACATCAG 2153429
Query 139380 CGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAA 139439
| ||| |||| ||| || || ||| ||||||| ||||| || ||||| | ||||
Sbjct 2153430 AGTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAG 2153489
Query 139440 CAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAA 139497
| | |||||| || | || ||| || || | | || | | || |||||
Sbjct 2153490 GAAGAGATCGCGGGCACGAATCTCCTCC-TTGCCGTGATTC-TTGCGGAGGTCCAGGAAT 2153547
Query 139498 TCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG--- 139554
||||| || ||||| ||||| || |||||||||||||| | ||||| || |||
Sbjct 2153548 TCAAAGACATCAGCATGCCACGGCTCCAGATAGATGGCAAAGGCGCCAGGGCGCTTGTTC 2153607
Query 139555 CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCG 139614
|| || |||||||| | ||| | | || ||||| ||||| | ||| || | ||||
Sbjct 2153608 CCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGGATGATACCG 2153667
Query 139615 CTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACA 139671
||| || |||||||| | |||| | || | || || || | | || ||
Sbjct 2153668 TTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTG---GCGCGAATGCGGTGGACG 2153724
Query 139672 TTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTA 139730
|||| ||| || || || | | ||||| || | ||||| || | | || |||||
Sbjct 2153725 TTGAGGCCAATGCCACCTGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGGGTATCGTA 2153783
Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790
|| || |||||||| |||| ||| ||| || ||||| || || || |||| |
Sbjct 2153784 GATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGAAGCAAGAAGAGAGCTGCGCCTG 2153843
Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAA 139850
|| ||||| || ||||| || ||||| || || | | |||||| |
Sbjct 2153844 AGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTAAAGAACTTGGACGACATGAG 2153903
Query 139851 TTCGTACGTTTCGATG--GCGCTC-ACAATATCCCTTCCGTGGATACCGACAGAGACTCG 139907
| ||| || || ||| ||||| || | || ||| ||| || || | ||| ||
Sbjct 2153904 GTTGTAGGTCTCAATGACACGCTCGACGTTGTC---TCCCCAGATGCCCACGGCGACACG 2153960
Query 139908 CATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACCG 139965
||| | ||| || ||| ||| ||| | | | ||| |||| || || || ||||
Sbjct 2153961 CATAATCATGTGCTGGGGCCGCTCGACGATCTTGCCATCGAGCTTGAGGAGGTATGACCG 2154020
Query 139966 TTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||| || |||||| | ||||||||| |||||||| ||
Sbjct 2154021 --CTCGAGCGTCTTGAACCCAAAGTACTGGTAGTTGAAGTC 2154059
>seq1
Length=7551078
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || || || || || || || ||||| || || ||
Sbjct 7246546 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCC 7246605
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || |||||||| ||||| || || || || ||||||
Sbjct 7246606 TCGGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAT 7246665
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || ||||||| ||||| || ||||| ||||| | | | | || || ||
Sbjct 7246666 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 7246725
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||| ||||| || ||| | ||| |||| ||||||| ||
Sbjct 7246726 AACATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775
>seq5
Length=3107351
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||| | || || || ||||| ||||| || || ||| || |
Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| || | ||| || || ||||| || || || || || |||||
Sbjct 1009938 GATACCATCGATAACGTGAAGAGCAAA-ATTCAGGACAAGGAGGGTATTCCCCCGGATCA 1009880
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| ||||| || ||||| ||||| | | | | | || ||||| ||
Sbjct 1009879 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAA 1009820
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
||| || ||||| ||||| || ||
Sbjct 1009819 CATCCAGAAGGAGTCGACGCTGCA 1009796
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || || || || ||||| ||| || |
Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || |||||
Sbjct 1010166 GACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAG 1010107
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| ||||| || ||||||||||| | | | || ||||| |||
Sbjct 1010106 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAAC 1010047
Query 24884 ATTCAAAAGGA 24894
|| || |||||
Sbjct 1010046 ATCCAGAAGGA 1010036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897504396760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |