Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 188 6e-43 seq1 113 4e-20 seq5 100 3e-16 >seq2 Length=6127077 Score = 188 bits (208), Expect = 6e-43 Identities = 983/1541 (64%), Gaps = 76/1541 (5%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | ||| || |||||||| |||| || || || ||| |||||| ||| | || Sbjct 2152560 GTTGACGACTTGGAATTCACCAGCCAGCACGCGTCGTTGGTAGATGTTGGACGTGTACGG 2152619 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | ||||||||||| || ||||| | |||| | || || ||||| || | Sbjct 2152620 CTCGAAGCACTCGTTGTTTCCGAGGATCTGGGACGTGCTTGCCGTGGGCATAGGAGCGAG 2152679 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || ||| ||||||| ||| || |||||||| | |||| |||| ||||||||| Sbjct 2152680 CAGCAGACTGTTCCGTACACCATGCTGCTTGATTTGCGCCTTCAGCGTGTCCCAGTCCCA 2152739 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| || || ||||||||| ||||| || | | |||| || | ||| Sbjct 2152740 GAGGTCGGAGGGCTTGACGTTCCACATGTCGTATTGAAGCTCTCCC-----TGGGAGACA 2152794 Query 138741 G-----CCTTCGTACGAATCGTATA----CACCAAACTCTTGCGCCAACTCGTTGCTCGC 138791 | || ||||| | ||| || | | || |||| || | ||| || || Sbjct 2152795 GGCGAACCCTCGTAGG--TCGAGTAAGGGCCCTCCAC-CTTG-GCGAGCTCCATGGAGGC 2152850 Query 138792 CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGC 138851 ||| || ||| | | |||||| || ||| ||||||| || ||| || ||||||| Sbjct 2152851 CTCAAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCGGG 2152910 Query 138852 GCTCTCGTACGGCATGCGGAGCATCG-TGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910 |||| | ||||| || || | || ||||||||| || ||||| || || || || | Sbjct 2152911 AGACTCGAAGGGCATACGAAG-AGCGAGGAACGCGTCCGCAAGCCCCTGGACACCGACGC 2152969 Query 138911 CGACAGGGCGATGGCGCAGATTTGACGCTTT----TGCGGCTTCGATAGGATAATAGTTT 138966 | | ||||| || |||| || ||| | ||| | ||||| || |||| ||| Sbjct 2152970 CAATCGGGCGGTGACGCA----TGTTGCTGTTCCGTGCCTCCTCGATGGGGTAATGGTTG 2153025 Query 138967 ACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TC 139025 ||||||| ||| |||| | || |||||||| ||||| || | | | | | | || Sbjct 2153026 ACATCGACGATCCTGTTCAGGTTCCGCACGACAACCTTGGT-GACCTCGTGGAGCTTCTC 2153084 Query 139026 AAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGA 139085 ||| ||| | | | || |||| || ||| || || | | | || || Sbjct 2153085 AAAGTCGAA---GACACCCTTGTTGTAATCGATGT-----AAGAAGGCAGCGC-AAGGGA 2153135 Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145 ||| | |||||| || || || || || || ||| ||| |||||||| |||| || | Sbjct 2153136 GGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGCAGTACTCGACAATCTCGGTGCAGAG 2153195 Query 139146 ATTACTACACTTG---ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATC 139202 | | | ||| || || || || || | || ||||| || ||||| || ||| Sbjct 2153196 GT---TGGAGTTGCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATC 2153252 Query 139203 TTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA 139262 ||||| ||||| | || | || || || || | ||| | ||| | | | Sbjct 2153253 CTTGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCTGCGCCTCGAGGATGGCGTACCAGAG 2153312 Query 139263 GTCCCTAGCTT---GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAG 139319 | | ||| | || | | || || | | || |||||||| ||||| || Sbjct 2153313 CTTCTGAGCCTTGAGTGTCTTGCGACCG---CGGCCCTCAGCTTCGTACTTCTCGTACAG 2153369 Query 139320 TTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAG 139379 | || || || || ||| ||| | ||| || |||||| || || ||||| || Sbjct 2153370 GGCTTCAAACTCATCGCCATAGCAGTCGGCAAGGCCGGGACACTCGTTGGGGCACATCAG 2153429 Query 139380 CGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAA 139439 | ||| |||| ||| || || ||| ||||||| ||||| || ||||| | |||| Sbjct 2153430 AGTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAG 2153489 Query 139440 CAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAA 139497 | | |||||| || | || ||| || || | | || | | || ||||| Sbjct 2153490 GAAGAGATCGCGGGCACGAATCTCCTCC-TTGCCGTGATTC-TTGCGGAGGTCCAGGAAT 2153547 Query 139498 TCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG--- 139554 ||||| || ||||| ||||| || |||||||||||||| | ||||| || ||| Sbjct 2153548 TCAAAGACATCAGCATGCCACGGCTCCAGATAGATGGCAAAGGCGCCAGGGCGCTTGTTC 2153607 Query 139555 CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCG 139614 || || |||||||| | ||| | | || ||||| ||||| | ||| || | |||| Sbjct 2153608 CCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGGATGATACCG 2153667 Query 139615 CTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACA 139671 ||| || |||||||| | |||| | || | || || || | | || || Sbjct 2153668 TTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTG---GCGCGAATGCGGTGGACG 2153724 Query 139672 TTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTA 139730 |||| ||| || || || | | ||||| || | ||||| || | | || ||||| Sbjct 2153725 TTGAGGCCAATGCCACCTGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGGGTATCGTA 2153783 Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790 || || |||||||| |||| ||| ||| || ||||| || || || |||| | Sbjct 2153784 GATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGAAGCAAGAAGAGAGCTGCGCCTG 2153843 Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAA 139850 || ||||| || ||||| || ||||| || || | | |||||| | Sbjct 2153844 AGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTAAAGAACTTGGACGACATGAG 2153903 Query 139851 TTCGTACGTTTCGATG--GCGCTC-ACAATATCCCTTCCGTGGATACCGACAGAGACTCG 139907 | ||| || || ||| ||||| || | || ||| ||| || || | ||| || Sbjct 2153904 GTTGTAGGTCTCAATGACACGCTCGACGTTGTC---TCCCCAGATGCCCACGGCGACACG 2153960 Query 139908 CATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACCG 139965 ||| | ||| || ||| ||| ||| | | | ||| |||| || || || |||| Sbjct 2153961 CATAATCATGTGCTGGGGCCGCTCGACGATCTTGCCATCGAGCTTGAGGAGGTATGACCG 2154020 Query 139966 TTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||| || |||||| | ||||||||| |||||||| || Sbjct 2154021 --CTCGAGCGTCTTGAACCCAAAGTACTGGTAGTTGAAGTC 2154059 >seq1 Length=7551078 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || || Sbjct 7246546 ACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCC 7246605 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || |||||||| ||||| || || || || |||||| Sbjct 7246606 TCGGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAT 7246665 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||||| ||||| || ||||| ||||| | | | | || || || Sbjct 7246666 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 7246725 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| || ||| | ||| |||| ||||||| || Sbjct 7246726 AACATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775 >seq5 Length=3107351 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || ||||| ||||| || || ||| || | Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || || ||||| || || || || || ||||| Sbjct 1009938 GATACCATCGATAACGTGAAGAGCAAA-ATTCAGGACAAGGAGGGTATTCCCCCGGATCA 1009880 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || ||||| ||||| | | | | | || ||||| || Sbjct 1009879 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAA 1009820 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 1009819 CATCCAGAAGGAGTCGACGCTGCA 1009796 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || || ||||| ||| || | Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || ||||| Sbjct 1010166 GACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAG 1010107 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||||||||| | | | || ||||| ||| Sbjct 1010106 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAAC 1010047 Query 24884 ATTCAAAAGGA 24894 || || ||||| Sbjct 1010046 ATCCAGAAGGA 1010036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897504396760