Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 134 9e-27 seq5 127 1e-24 seq2 95.1 8e-15 >seq1 Length=7551078 Score = 134 bits (148), Expect = 9e-27 Identities = 162/218 (74%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 7246761 CAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 7246702 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || ||||| || | || | ||||||||||| Sbjct 7246701 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTC 7246642 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || || |||||| || | ||| | Sbjct 7246641 CTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGA 7246586 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||| |||||||||||||| || |||||||||||| Sbjct 7246585 TGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 7246548 >seq5 Length=3107351 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||||||||||||| ||||| || || || || |||| | || Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||||||||| || || ||||| || | || | ||||||||||| Sbjct 1010075 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCT 1010134 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||||| || | ||| |||||| Sbjct 1010135 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTC 1010194 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| || ||||| |||||| Sbjct 1010195 TTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1010227 Score = 102 bits (112), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || ||||| ||| ||||| | || || || |||||||||||||| Sbjct 1009807 CTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 1009866 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||| || | || | ||||||||||| | ||||| || || Sbjct 1009867 GATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATTTTGCTCTTCAC--- 1009923 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || || || || || | || || ||||| || || | |||| Sbjct 1009924 -GTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCT 1009982 Query 34962 TTACAAAGATCTGCATG 34978 | || |||||||||||| Sbjct 1009983 TCACGAAGATCTGCATG 1009999 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||||||||| ||||| || ||| | || | || Sbjct 1010552 AGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCC 1010611 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||| ||||| || |||||||| |||| | ||||||||||| Sbjct 1010612 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 1010670 >seq2 Length=6127077 Score = 95.1 bits (104), Expect = 8e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||||||||| ||||| || ||| | || | || || || ||||| || ||||||| Sbjct 5085454 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 5085513 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || || || || | || | ||||||||||| | || || || || Sbjct 5085514 TGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 5085573 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || || |||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct 5085574 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 5085633 Query 34968 AG 34969 || Sbjct 5085634 AG 5085635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692732520523