Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 9e-27
seq5 127 1e-24
seq2 95.1 8e-15
>seq1
Length=7551078
Score = 134 bits (148), Expect = 9e-27
Identities = 162/218 (74%), Gaps = 8/218 (4%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 7246761 CAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 7246702
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || ||||| || | || | |||||||||||
Sbjct 7246701 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTC 7246642
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || || |||||| || | ||| |
Sbjct 7246641 CTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGA 7246586
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||| |||||||||||||| || ||||||||||||
Sbjct 7246585 TGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 7246548
>seq5
Length=3107351
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||||||||||||| ||||| || || || || |||| | ||
Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||| || || ||||| || | || | |||||||||||
Sbjct 1010075 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCT 1010134
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||||| || | ||| ||||||
Sbjct 1010135 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTC 1010194
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||| ||||| || ||||| ||||||
Sbjct 1010195 TTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1010227
Score = 102 bits (112), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || ||||| ||| ||||| | || || || ||||||||||||||
Sbjct 1009807 CTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 1009866
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || ||||| || | || | ||||||||||| | ||||| || ||
Sbjct 1009867 GATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATTTTGCTCTTCAC--- 1009923
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| ||||||| || || || || || | || || ||||| || || | ||||
Sbjct 1009924 -GTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCT 1009982
Query 34962 TTACAAAGATCTGCATG 34978
| || ||||||||||||
Sbjct 1009983 TCACGAAGATCTGCATG 1009999
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || || |||| ||| ||||||||||||||| ||||| || ||| | || | ||
Sbjct 1010552 AGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCC 1010611
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||| ||||| || |||||||| |||| | |||||||||||
Sbjct 1010612 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 1010670
>seq2
Length=6127077
Score = 95.1 bits (104), Expect = 8e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||||||||| ||||| || ||| | || | || || || ||||| || |||||||
Sbjct 5085454 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 5085513
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || || || || | || | ||||||||||| | || || || ||
Sbjct 5085514 TGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 5085573
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || || |||||| |||| ||| |||||||| ||||| |||||||| || |
Sbjct 5085574 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 5085633
Query 34968 AG 34969
||
Sbjct 5085634 AG 5085635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692732520523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |