Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 7e-21
>seq5
Length=3107351
Score = 116 bits (128), Expect = 7e-21
Identities = 152/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
||||| || || || ||||| || || ||||| || || | | ||||| || || ||
Sbjct 1009796 TGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGC 1009855
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
||||| || ||||| || | || ||||| || || || || ||||| || ||||| |||
Sbjct 1009856 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAAT-TTT 1009914
Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTG 82785
||| || || || || || ||||| | ||| ||| || |||| || || ||||| || |
Sbjct 1009915 GCTCTTCACGTTATCGATGGTATC-TGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAG 1009973
Query 82786 TCAACGTCTTTACAAATATCTGCAT 82810
|||||||||| || || ||||||||
Sbjct 1009974 TCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 95.1 bits (104), Expect = 2e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || || || || || || | | ||
Sbjct 1010239 ACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCC 1010298
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| ||||| || ||||||||||| || | || || || ||||| || || |||||
Sbjct 1010299 GTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 1010358
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || ||||| | || || || || ||||| || | || || || | || ||
Sbjct 1010359 ATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGAT 1010418
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATAT 82804
|||||||| || | ||||| || | |||
Sbjct 1010419 GGTCTTGCCGGTAAGGGTCTTGACGACTAT 1010448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826986145763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |