Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq5 116 7e-21 >seq5 Length=3107351 Score = 116 bits (128), Expect = 7e-21 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| || || || ||||| || || ||||| || || | | ||||| || || || Sbjct 1009796 TGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGC 1009855 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| || ||||| || | || ||||| || || || || ||||| || ||||| ||| Sbjct 1009856 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAAT-TTT 1009914 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTG 82785 ||| || || || || || ||||| | ||| ||| || |||| || || ||||| || | Sbjct 1009915 GCTCTTCACGTTATCGATGGTATC-TGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAG 1009973 Query 82786 TCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| || || |||||||| Sbjct 1009974 TCAACGTCTTCACGAAGATCTGCAT 1009998 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| || || || || || || | | || Sbjct 1010239 ACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCC 1010298 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| ||||| || ||||||||||| || | || || || ||||| || || ||||| Sbjct 1010299 GTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 1010358 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| | || || || || ||||| || | || || || | || || Sbjct 1010359 ATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGAT 1010418 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 |||||||| || | ||||| || | ||| Sbjct 1010419 GGTCTTGCCGGTAAGGGTCTTGACGACTAT 1010448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826986145763