Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 107 1e-18 seq1 84.2 1e-11 >seq5 Length=3107351 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || ||||||||||| ||||| ||||| |||| || | || |||||||| || Sbjct 1009807 CTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 1009866 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | |||||||||||| | || | ||| || ||||| |||||| |||| | Sbjct 1009867 GATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTT 1009926 Query 33678 AGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 | | ||| || |||||||| || | |||||| || || || || ||||| || || Sbjct 1009927 ATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCAC 1009986 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 1009987 GAAGATCTGCAT 1009998 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || ||||||||||| ||||| ||||| |||| |||| || Sbjct 1010024 TGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGC 1010083 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | |||||||||||| | || | || || ||||| || || Sbjct 1010084 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTT- 1010142 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | || | ||| | |||||| ||||| || || | ||||| || || || || Sbjct 1010143 GGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGT 1010202 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||| ||||| Sbjct 1010203 GAGAGTCTTGACGAAGATTTGCAT 1010226 >seq1 Length=7551078 Score = 84.2 bits (92), Expect = 1e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | || || || ||| || || |||||||| |||| Sbjct 7246777 CACCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 7246718 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| ||||| |||| || | || || ||||| || |||| ||||||||||| | | Sbjct 7246717 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGG 7246658 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || | | |||| ||| | ||||| || || Sbjct 7246657 GGATGCCCTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATAGTGTCCGAGGACTCG 7246599 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 || || | ||||| || || || || | || || || ||||||||||| |||| Sbjct 7246598 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGGTTG 7246544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703931896640