Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 1e-20
seq2 95.1 1e-14
>seq5
Length=3107351
Score = 114 bits (126), Expect = 1e-20
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| | | ||| ||| |||| || |||||||| || || ||
Sbjct 1009807 CTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 1009866
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG--CTTCAGA 35662
|| | |||||||| |||| |||| | |||||||||| ||| ||||| |||||
Sbjct 1009867 GATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCC-TGA-ATTTTGCTCTTCACG 1009924
Query 35663 GTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722
| | | || || ||||||||||||| |||||| || || || ||||| || |||
Sbjct 1009925 TTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTC 1009984
Query 35723 ACAAATATCTGCAT 35736
|| || ||||||||
Sbjct 1009985 ACGAAGATCTGCAT 1009998
Score = 100 bits (110), Expect = 3e-16
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || |||| || || ||||| || |||||
Sbjct 1010263 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAA 1010322
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || |||||| ||| |||||| ||| | ||
Sbjct 1010323 GATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGA-CGT 1010381
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||||| || || ||||| | ||||| || || || || | || || |
Sbjct 1010382 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 1010441
Query 35724 CAAATAT 35730
| | |||
Sbjct 1010442 CGACTAT 1010448
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || ||||||||||| | | || || |||| ||||||||||| ||
Sbjct 1010030 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCG 1010089
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || || | |||||||| |||| |||| || ||||||||| |||||| |||
Sbjct 1010090 GCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTG 1010149
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | ||||| ||||| || || | ||||| || || || || | |||
Sbjct 1010150 A-CGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGT 1010208
Query 35719 TTTCACAAATATCTGCAT 35736
|| || || || |||||
Sbjct 1010209 CTTGACGAAGATTTGCAT 1010226
Score = 91.5 bits (100), Expect = 1e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| || ||| || |||| || |||||||| || || ||
Sbjct 1010572 CTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAA 1010631
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | || | || |||||||||| ||||| ||| | | |
Sbjct 1010632 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 1010691
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | || || ||| |||||||| | ||||| || || || ||
Sbjct 1010692 GTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739
>seq2
Length=6127077
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 35541 TACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCG 35600
||| | |||| ||||||||||| || | | ||| || |||| || |||||||| || |
Sbjct 5085448 TACACACCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAG 5085507
Query 35601 CAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660
| || || | ||||| || || | || | || |||||||||| |||||| |||||
Sbjct 5085508 CGAAGATGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCA 5085567
Query 35661 GAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
| | | | ||||||| || || ||||| | ||||| || || ||||||| || |
Sbjct 5085568 CATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 5085627
Query 35721 TCACAAA 35727
|||| ||
Sbjct 5085628 TCACGAA 5085634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793504206360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |