Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 1e-20
seq2 86.0 5e-12
>seq5
Length=3107351
Score = 114 bits (126), Expect = 1e-20
Identities = 167/235 (71%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 27014 ATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGT 27072
|||| || || ||||| | ||| | || | ||| | ||| || || || || || ||||
Sbjct 1009764 ATTACTGACCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGT 1009823
Query 27073 AGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGAT 27132
| || | | ||||| |||| || ||||| || |||||| | ||||||||||| ||||
Sbjct 1009824 AATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGAT 1009883
Query 27133 CCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGG 27192
|||| || | |||||| || || || ||| | |||| | | || | || |||| ||
Sbjct 1009884 CCGGGGGAATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGG 1009943
Query 27193 CTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || || || || |||| || || |||| || ||||| ||||| |||||
Sbjct 1009944 ATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 105 bits (116), Expect = 6e-18
Identities = 121/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 27085 TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACAC 27144
|||| |||| || ||||| || |||||| | ||||||||||| |||||||| || | |
Sbjct 1010064 TGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGC 1010123
Query 27145 CCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTA 27204
|||| || || ||||||| || | | | || | ||||| | || ||| |||||||
Sbjct 1010124 CCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTA 1010183
Query 27205 GAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || | ||||| || ||||| || || |||||||||||
Sbjct 1010184 GGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226
>seq2
Length=6127077
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| ||||| |||||||| | | | || |||| |||||||| || || ||| | |||
Sbjct 5085456 TTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 5085515
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|| ||||||||||| || || | ||||| || || ||||||| |||| | ||
Sbjct 5085516 AGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 5085575
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
| ||||| | || || || || || || || | ||||||||||| || ||||| |||
Sbjct 5085576 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 5085635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934311958904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |