Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2 210 3e-49
seq1 82.4 1e-10
>seq2
Length=6127077
Score = 210 bits (232), Expect = 3e-49
Identities = 1045/1644 (64%), Gaps = 35/1644 (2%)
Strand=Plus/Plus
Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584
|| ||||| || || ||| || ||||||| || ||||||| | | ||| ||||||
Sbjct 2152417 ATCTCCCAGACGGTCTTATACAGTGTCTTGATGTCGTCTGGGAGGTTGGGGATGTTCTGG 2152476
Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644
|| || || || | | ||| ||| ||||||| | |||||| || |||| |
Sbjct 2152477 ATCGAGCCGCCGTCGGCAATGATGCGATTCTTCATACTATCGGACCATAGGCCAAGGTCG 2152536
Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704
||| || ||| || |||||| | || ||||| || || | ||
Sbjct 2152537 ACGAGATCCCTGAGCAGCCAGGGGTTGACGACTTGGAATTCACCAGCCAGCACGCGTCGT 2152596
Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764
|||||||||| | ||||| || || ||||| || || || || | ||| || | |||
Sbjct 2152597 TGGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTTCCGAGGATCTGGGACGTG 2152656
Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824
|| || ||||| || || | || |||||||| || | ||| | || |||||| |
Sbjct 2152657 CTTGCCGTGGGCATAGGAGCGAGCAGCAGACTGTTCCGTACACCATGCTGCTTGATTTGC 2152716
Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|||| || |||||||| || | | || || || |||| ||||||| | ||
Sbjct 2152717 GCCTTCAGCGTGTCCCAGTCCCAGAGGTCGGAGGGCTTGACGTTCC-ACATGTCGTATTG 2152775
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|||| | || ||||| | || |||||||| |||| || | || | | | ||
Sbjct 2152776 AAGCTCTCCCTGGGAGACAGGCGAACCCTCGTAGGTCGAGTAAGGGCCCTCCACCTTGGC 2152835
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || | ||||| |||| ||||| || ||||| || ||||| | ||||
Sbjct 2152836 GAGCTCCATGGAGGCCTCAAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTCAG 2152895
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGAC 111062
||| || || || || || | | | | | | | || | ||||| || |
Sbjct 2152896 CTCACGAGCCTCGGGAGACTCGAAGG-GCATACGAAGAGCGAGGAACGCGTCCGCAAGCC 2152954
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122
| || ||||| | ||||| || | ||| ||||| || || || || ||| | ||
Sbjct 2152955 CCTGGACACCGACGCCAATCGGGCGGTGACGCATGTTGCTGTTCCGTGCCTCCTCGATGG 2153014
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
| ||| || || | || | ||| || || |||| ||| |||| || |
Sbjct 2153015 GGTAATGGTTGACATCGACGATCCTGTTCAGGTTCCGCACGACAACCTTGGTGACCTCGT 2153074
Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTG 111242
| || || ||| | || || | | | | || || || || || || | |
Sbjct 2153075 GGAGCTTCTCAAAGTCGAAGACACCCTTGTTGTAATCGATGTAAGAAGGCAGCGCAAGGG 2153134
Query 111243 ATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATA 111302
| ||||| ||||||||||| |||||| | |||||| | ||| || || || |
Sbjct 2153135 AGGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGCAGTACTCGACAATCTCGGTGCAGA 2153194
Query 111303 AGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCT 111362
|||||| | ||| || ||||| ||||| ||||| ||||| |||||| |||||
Sbjct 2153195 GGTTGGAGTTGCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCT 2153254
Query 111363 TGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACA 111421
||||||||||| |||| |||||||||| ||||| | | ||| || || | ||| | |
Sbjct 2153255 TGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCTGCGCCTCGAGGATGGCGTACCAGAGCT 2153314
Query 111422 TCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479
|| | | || | | || | | | | || ||||| || |||||||| ||| ||||
Sbjct 2153315 TCTGAGCCTTG---AGTGTCTTGCGACCGCGGCCCTCAGCTTCGTACTTCTCGTACAGGG 2153371
Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538
|||||||||| || ||| || ||||| || || || || || || || | |||
Sbjct 2153372 CTTCAAACTCATC-GCCATAGCAGTCGGCAAGGCCGGGACACTCGTTGGGGCACATCAGA 2153430
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| | ||| | ||| || ||||||||||| || || || ||||| ||||
Sbjct 2153431 GTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGG 2153490
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|||||||| | ||| ||| || | || || || || | || ||||| ||
Sbjct 2153491 AAGAGATCGCGGGCACGAATCTCCTCCTTGCCGTGATTCTTGCGGAGGTCCAGGAATTCA 2153550
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAG------ACTGCGATAGATCCCTT-TCGACG 111711
| || ||| || ||||| ||||| |||||| | ||| || | ||| | ||
Sbjct 2153551 AAGACATCAGCATGCCACGGCTCCAGATAGATGGCAAAGGCGCCAGGGCGCTTGTTCCCG 2153610
Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771
||| |||| ||||| || || ||| ||| || ||||| ||||| || || |||||
Sbjct 2153611 CCC----TGATCGACATATCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGGATGATACC 2153666
Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831
| || ||| || || || || ||| |||| | | |||| ||
Sbjct 2153667 GTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTGGCGCGAATGCGGTGGACGTT 2153726
Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAG 111889
| ||||| || || ||| ||| ||||| | ||||| | | | | || || | |||
Sbjct 2153727 GAGGCCAATGCCACCTGCCATCTTGGAGATCATGGCGCA-AGT-CTTGAGGGTATCGTAG 2153784
Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949
|| || | || ||| ||||| | ||| |||||||||| || | |||||
Sbjct 2153785 ATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGAAGCAAGAAGAGAGCTGCGCCTGA 2153844
Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCT 112007
|| ||||| || |||||||| || || | ||||| | | | | ||||| |||||
Sbjct 2153845 GGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTG--GGTAAAGAACTTGGACGACATGA 2153902
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||| ||||| | |||| || | || || || |||||| | ||||| ||||
Sbjct 2153903 GGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCCCAGATGCCCACGGCGACACGCA 2153962
Query 112068 TGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCTCTT 112125
| | ||||| ||| || || | || ||||||||||| |||| || || |
Sbjct 2153963 TAATCATGTGCTGGGGCCGCTCGACGATCTTGCCATCGAGC--TTGAGGAGGTATGACCG 2154020
Query 112126 CTCAAGGGTTTTGAGACCAAAGTA 112149
||| || || |||| ||||||||
Sbjct 2154021 CTCGAGCGTCTTGAACCCAAAGTA 2154044
>seq1
Length=7551078
Score = 82.4 bits (90), Expect = 1e-10
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 164658 GGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 164717
|| |||||||| ||||| ||||||| || | ||||| || | |||||||| |||
Sbjct 4924185 GGCGCGGGTGTGATTGACGCCGACTACCGCGGCCAGGTCAAGGTTCTCCTCTTCAACCAC 4924126
Query 164718 GGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGC-G 164776
| |||| ||||||||||| ||| | || || || ||||| || || ||||| |||| |
Sbjct 4924125 GCCGACAGCGACTTTGAGGTCAAGGAGGGCGACCGGATCGCCCAGCTCGTCCTCGAGCGG 4924066
Query 164777 CTGTGAAACACCCGATGTGGAGGA 164800
| || |||||||| || ||||
Sbjct 4924065 ATCTG-CACACCCGAGGTCCAGGA 4924043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |