Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 210 3e-49 seq1 82.4 1e-10 >seq2 Length=6127077 Score = 210 bits (232), Expect = 3e-49 Identities = 1045/1644 (64%), Gaps = 35/1644 (2%) Strand=Plus/Plus Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584 || ||||| || || ||| || ||||||| || ||||||| | | ||| |||||| Sbjct 2152417 ATCTCCCAGACGGTCTTATACAGTGTCTTGATGTCGTCTGGGAGGTTGGGGATGTTCTGG 2152476 Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644 || || || || | | ||| ||| ||||||| | |||||| || |||| | Sbjct 2152477 ATCGAGCCGCCGTCGGCAATGATGCGATTCTTCATACTATCGGACCATAGGCCAAGGTCG 2152536 Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704 ||| || ||| || |||||| | || ||||| || || | || Sbjct 2152537 ACGAGATCCCTGAGCAGCCAGGGGTTGACGACTTGGAATTCACCAGCCAGCACGCGTCGT 2152596 Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764 |||||||||| | ||||| || || ||||| || || || || | ||| || | ||| Sbjct 2152597 TGGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTTCCGAGGATCTGGGACGTG 2152656 Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 || || ||||| || || | || |||||||| || | ||| | || |||||| | Sbjct 2152657 CTTGCCGTGGGCATAGGAGCGAGCAGCAGACTGTTCCGTACACCATGCTGCTTGATTTGC 2152716 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 |||| || |||||||| || | | || || || |||| ||||||| | || Sbjct 2152717 GCCTTCAGCGTGTCCCAGTCCCAGAGGTCGGAGGGCTTGACGTTCC-ACATGTCGTATTG 2152775 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 |||| | || ||||| | || |||||||| |||| || | || | | | || Sbjct 2152776 AAGCTCTCCCTGGGAGACAGGCGAACCCTCGTAGGTCGAGTAAGGGCCCTCCACCTTGGC 2152835 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | || | ||||| |||| ||||| || ||||| || ||||| | |||| Sbjct 2152836 GAGCTCCATGGAGGCCTCAAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTGTTCAG 2152895 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGAC 111062 ||| || || || || || | | | | | | | || | ||||| || | Sbjct 2152896 CTCACGAGCCTCGGGAGACTCGAAGG-GCATACGAAGAGCGAGGAACGCGTCCGCAAGCC 2152954 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122 | || ||||| | ||||| || | ||| ||||| || || || || ||| | || Sbjct 2152955 CCTGGACACCGACGCCAATCGGGCGGTGACGCATGTTGCTGTTCCGTGCCTCCTCGATGG 2153014 Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182 | ||| || || | || | ||| || || |||| ||| |||| || | Sbjct 2153015 GGTAATGGTTGACATCGACGATCCTGTTCAGGTTCCGCACGACAACCTTGGTGACCTCGT 2153074 Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTG 111242 | || || ||| | || || | | | | || || || || || || | | Sbjct 2153075 GGAGCTTCTCAAAGTCGAAGACACCCTTGTTGTAATCGATGTAAGAAGGCAGCGCAAGGG 2153134 Query 111243 ATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATA 111302 | ||||| ||||||||||| |||||| | |||||| | ||| || || || | Sbjct 2153135 AGGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGCAGTACTCGACAATCTCGGTGCAGA 2153194 Query 111303 AGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCT 111362 |||||| | ||| || ||||| ||||| ||||| ||||| |||||| ||||| Sbjct 2153195 GGTTGGAGTTGCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCT 2153254 Query 111363 TGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACA 111421 ||||||||||| |||| |||||||||| ||||| | | ||| || || | ||| | | Sbjct 2153255 TGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCTGCGCCTCGAGGATGGCGTACCAGAGCT 2153314 Query 111422 TCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 || | | || | | || | | | | || ||||| || |||||||| ||| |||| Sbjct 2153315 TCTGAGCCTTG---AGTGTCTTGCGACCGCGGCCCTCAGCTTCGTACTTCTCGTACAGGG 2153371 Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 |||||||||| || ||| || ||||| || || || || || || || | ||| Sbjct 2153372 CTTCAAACTCATC-GCCATAGCAGTCGGCAAGGCCGGGACACTCGTTGGGGCACATCAGA 2153430 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| | ||| || ||||||||||| || || || ||||| |||| Sbjct 2153431 GTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGAGATCGGGGATCCAGAGGGCGAGG 2153490 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 |||||||| | ||| ||| || | || || || || | || ||||| || Sbjct 2153491 AAGAGATCGCGGGCACGAATCTCCTCCTTGCCGTGATTCTTGCGGAGGTCCAGGAATTCA 2153550 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAG------ACTGCGATAGATCCCTT-TCGACG 111711 | || ||| || ||||| ||||| |||||| | ||| || | ||| | || Sbjct 2153551 AAGACATCAGCATGCCACGGCTCCAGATAGATGGCAAAGGCGCCAGGGCGCTTGTTCCCG 2153610 Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 ||| |||| ||||| || || ||| ||| || ||||| ||||| || || ||||| Sbjct 2153611 CCC----TGATCGACATATCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGGATGATACC 2153666 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831 | || ||| || || || || ||| |||| | | |||| || Sbjct 2153667 GTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTGGCGCGAATGCGGTGGACGTT 2153726 Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAG 111889 | ||||| || || ||| ||| ||||| | ||||| | | | | || || | ||| Sbjct 2153727 GAGGCCAATGCCACCTGCCATCTTGGAGATCATGGCGCA-AGT-CTTGAGGGTATCGTAG 2153784 Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949 || || | || ||| ||||| | ||| |||||||||| || | ||||| Sbjct 2153785 ATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGAAGCAAGAAGAGAGCTGCGCCTGA 2153844 Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCT 112007 || ||||| || |||||||| || || | ||||| | | | | ||||| ||||| Sbjct 2153845 GGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTG--GGTAAAGAACTTGGACGACATGA 2153902 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| ||||| | |||| || | || || || |||||| | ||||| |||| Sbjct 2153903 GGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCCCAGATGCCCACGGCGACACGCA 2153962 Query 112068 TGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCTCTT 112125 | | ||||| ||| || || | || ||||||||||| |||| || || | Sbjct 2153963 TAATCATGTGCTGGGGCCGCTCGACGATCTTGCCATCGAGC--TTGAGGAGGTATGACCG 2154020 Query 112126 CTCAAGGGTTTTGAGACCAAAGTA 112149 ||| || || |||| |||||||| Sbjct 2154021 CTCGAGCGTCTTGAACCCAAAGTA 2154044 >seq1 Length=7551078 Score = 82.4 bits (90), Expect = 1e-10 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 164658 GGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 164717 || |||||||| ||||| ||||||| || | ||||| || | |||||||| ||| Sbjct 4924185 GGCGCGGGTGTGATTGACGCCGACTACCGCGGCCAGGTCAAGGTTCTCCTCTTCAACCAC 4924126 Query 164718 GGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGC-G 164776 | |||| ||||||||||| ||| | || || || ||||| || || ||||| |||| | Sbjct 4924125 GCCGACAGCGACTTTGAGGTCAAGGAGGGCGACCGGATCGCCCAGCTCGTCCTCGAGCGG 4924066 Query 164777 CTGTGAAACACCCGATGTGGAGGA 164800 | || |||||||| || |||| Sbjct 4924065 ATCTG-CACACCCGAGGTCCAGGA 4924043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031866543200