Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 2e-24
seq6 109 2e-18
seq7 86.0 2e-11
>seq5
Length=3107351
Score = 129 bits (142), Expect = 2e-24
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| || || ||||| || || || || ||||| || | || ||||| ||
Sbjct 1009787 AGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCC 1009846
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
||||| || ||||| || ||||| ||||| |||||||| || ||||| || || || |||
Sbjct 1009847 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCC 1009906
Query 140646 TGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704
|||||||| ||| || || ||||| || | ||| || | ||| || || || || | ||
Sbjct 1009907 TGAATTTT-GCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGT 1009965
Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || | || || || || ||||||||
Sbjct 1009966 CTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 123 bits (136), Expect = 8e-23
Identities = 161/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| || ||||| | | || || || ||||| || ||||| || || || || |
Sbjct 1010220 TTTGCATGCCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGT 1010279
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || ||||||||||| || ||||||||||| || || ||||| |
Sbjct 1010280 AGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGT 1010339
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||||||||| || || |||||||| || || | || || || || |||| || || |
Sbjct 1010340 CAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGG 1010399
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || || || || | ||||| ||||| || || || ||
Sbjct 1010400 ACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1010442
Score = 114 bits (126), Expect = 4e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | |||||||||||||| || ||||| || ||||| || || ||
Sbjct 1010533 CATACCACCACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTC 1010592
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || ||||| || || || || || || || || ||||| || ||
Sbjct 1010593 GGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGG 1010652
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || |||||||| || | || ||||| || || | ||| || | ||
Sbjct 1010653 CGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTC 1010712
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| || || || | ||||| ||||| | |||
Sbjct 1010713 CACCTCGAGGGTGATGGTCTTGCCGGTGACTGT 1010745
>seq6
Length=2704119
Score = 109 bits (120), Expect = 2e-18
Identities = 247/369 (67%), Gaps = 2/369 (1%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590
||||| || ||||| | ||||| | || ||| || | |||||| ||| || |
Sbjct 1891774 CCCGAGGAGATTTCCGCCATGGTCCTCACCAAGATGCGCGAGACTGCTGAGAGC-TACCT 1891832
Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650
|| ||||| || || | ||||| | || || || ||||| || || || | |||||
Sbjct 1891833 CGGCGAAACCGTGACCAACGCTGTCGTCACCGTGCCCGCCTACTTCAACGACTCGCAGCG 1891892
Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710
|| || || || | ||| |||||| || | || || || | || || || ||
Sbjct 1891893 CCAGGCCACCAAGGACTCCGGCCTCATTGCCGGTCTCAACGTGCTCCGCATCATCAACGA 1891952
Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770
||||| || || || ||||| || || || || || | | ||| || || |
Sbjct 1891953 GCCCACCGCCGCCGCCATTGCCTACGGTCTCGACAAGAAGGTTGAGGGCGAGCGCAACGT 1892012
Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830
||| || |||||| | ||||||||||| || ||||| || || || || | || |||||
Sbjct 1892013 TCTCATCTTTGATCTCGGTGGTGGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGG 1892072
Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890
|| || || || || || || ||||| || || || |||||||| || || | || ||
Sbjct 1892073 CATCTTCGAGGTCAAGGCCACCGCTGGCGACACTCACCTTGGTGGTGAGGACATGGACAA 1892132
Query 349891 TCGTCTCGT 349899
|| |||||
Sbjct 1892133 CCGCCTCGT 1892141
>seq7
Length=2136105
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633
|| |||| ||| | ||| |||||||| || ||||| ||||| ||||||||||| ||||
Sbjct 1070492 GTGCGCCTATCCTAAAGCTGTTTTCCGGCGAAGATAAGACGCTGCTGATCAGGGAGAATC 1070433
Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693
|| ||||| |||||||| || || || || ||||| | || || | ||| |||||
Sbjct 1070432 CCCTCTTTGTCCTGAATCTTGCGCTTCACGTTGTCAATGGTATTCGAGGATTCCACTTCC 1070373
Query 140694 AGTGT 140698
|| ||
Sbjct 1070372 AGCGT 1070368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254069958651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |