Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 129 2e-24 seq6 109 2e-18 seq7 86.0 2e-11 >seq5 Length=3107351 Score = 129 bits (142), Expect = 2e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || ||||| || || || || ||||| || | || ||||| || Sbjct 1009787 AGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCC 1009846 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || ||||| || ||||| ||||| |||||||| || ||||| || || || ||| Sbjct 1009847 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCC 1009906 Query 140646 TGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 |||||||| ||| || || ||||| || | ||| || | ||| || || || || | || Sbjct 1009907 TGAATTTT-GCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGT 1009965 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || | || || || || |||||||| Sbjct 1009966 CTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998 Score = 123 bits (136), Expect = 8e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | || || || ||||| || ||||| || || || || | Sbjct 1010220 TTTGCATGCCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGT 1010279 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || ||||||||||| || ||||||||||| || || ||||| | Sbjct 1010280 AGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGT 1010339 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || |||||||| || || | || || || || |||| || || | Sbjct 1010340 CAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGG 1010399 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || || | ||||| ||||| || || || || Sbjct 1010400 ACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1010442 Score = 114 bits (126), Expect = 4e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||||||||| || ||||| || ||||| || || || Sbjct 1010533 CATACCACCACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTC 1010592 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || || || || || || ||||| || || Sbjct 1010593 GGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGG 1010652 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | || ||||| || || | ||| || | || Sbjct 1010653 CGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTC 1010712 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 || || || || | ||||| ||||| | ||| Sbjct 1010713 CACCTCGAGGGTGATGGTCTTGCCGGTGACTGT 1010745 >seq6 Length=2704119 Score = 109 bits (120), Expect = 2e-18 Identities = 247/369 (67%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590 ||||| || ||||| | ||||| | || ||| || | |||||| ||| || | Sbjct 1891774 CCCGAGGAGATTTCCGCCATGGTCCTCACCAAGATGCGCGAGACTGCTGAGAGC-TACCT 1891832 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || ||||| || || | ||||| | || || || ||||| || || || | ||||| Sbjct 1891833 CGGCGAAACCGTGACCAACGCTGTCGTCACCGTGCCCGCCTACTTCAACGACTCGCAGCG 1891892 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 || || || || | ||| |||||| || | || || || | || || || || Sbjct 1891893 CCAGGCCACCAAGGACTCCGGCCTCATTGCCGGTCTCAACGTGCTCCGCATCATCAACGA 1891952 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||||| || || || ||||| || || || || || | | ||| || || | Sbjct 1891953 GCCCACCGCCGCCGCCATTGCCTACGGTCTCGACAAGAAGGTTGAGGGCGAGCGCAACGT 1892012 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 ||| || |||||| | ||||||||||| || ||||| || || || || | || ||||| Sbjct 1892013 TCTCATCTTTGATCTCGGTGGTGGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGG 1892072 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || || || || || || ||||| || || || |||||||| || || | || || Sbjct 1892073 CATCTTCGAGGTCAAGGCCACCGCTGGCGACACTCACCTTGGTGGTGAGGACATGGACAA 1892132 Query 349891 TCGTCTCGT 349899 || ||||| Sbjct 1892133 CCGCCTCGT 1892141 >seq7 Length=2136105 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || |||| ||| | ||| |||||||| || ||||| ||||| ||||||||||| |||| Sbjct 1070492 GTGCGCCTATCCTAAAGCTGTTTTCCGGCGAAGATAAGACGCTGCTGATCAGGGAGAATC 1070433 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || ||||| |||||||| || || || || ||||| | || || | ||| ||||| Sbjct 1070432 CCCTCTTTGTCCTGAATCTTGCGCTTCACGTTGTCAATGGTATTCGAGGATTCCACTTCC 1070373 Query 140694 AGTGT 140698 || || Sbjct 1070372 AGCGT 1070368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254069958651