Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 277 2e-69 >seq2 Length=6127077 Score = 277 bits (306), Expect = 2e-69 Identities = 516/753 (69%), Gaps = 6/753 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| |||||| |||| ||| || ||| || | ||||||| |||||| ||| || Sbjct 2153963 ATGCGTGTCGCCGTGGGCATCTGGGGAGACAACGTCGAGCGTGTCATTGAGACCTACAAC 2153904 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| |||| |||||| |||||| | || || || |||||||| ||||| | Sbjct 2153903 CTCATGTCGTCCAAGTTCTTTACCCACGCCTCCCCCACTCTCTTCAACGCCGGTACTCCT 2153844 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || | ||| | || |||||||| || | |||||||||||| || || |||||| Sbjct 2153843 CAGGCGCAGCTCTCTTCTTGCTTCCTTGTCGATATGAAGGATGACAGCATTGAGGGCATC 2153784 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || |||||| || ||| ||||||||| | | ||||| || || || || Sbjct 2153783 TACGATACCCTCAAGACTTGCGCCATGATCTCCAAGATGGCAGGTGGCATTGGCCTCAAC 2153724 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | || | || || | ||| | ||| || || ||||| | | | | Sbjct 2153723 G--TCCACCGCATTCGCGCCACCGGTTCTTACATCGCCGGAACCAACGGTACCTCGAACG 2153666 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||| | || ||||||||||||||||||||||| ||||| || ||| | ||||| || Sbjct 2153665 GTATCATCCCCATGCTCCGCGTCTTCAACAACACCGCCCGATATGTCGATCAGGGCGGGA 2153606 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | || |||||||| || ||||||||||| || || | | || | Sbjct 2153605 ACAAGCGCCCTGGCGCCTTTGCCATCTATCTGGAGCCGTGGCATGCTGATGTCTTTGAAT 2153546 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672 | || || || || |||||| || | || ||||| || ||| || || || | Sbjct 2153545 TCCTGGACCTCCGCAAGAATCACGGCAAGGAGGAGATTCGTGCCCGCGATCTCTTCCTCG 2153486 Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732 | || ||||| || || ||||||||| | ||||||||| | | || ||| |||| Sbjct 2153485 CCCTCTGGATCCCCGATCTCTTCATGAAGCGAGTGGAGAAGAATGGCGATTGGACTCTGA 2153426 Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 ||||||| |||||||| |||||||| | | || ||| || || |||||| | | || Sbjct 2153425 TGTGCCCCAACGAGTGTCCCGGCCTTGCCGACTG-CTATGGCGATGAGTTTGAAGCCCTG 2153367 Query 53792 TATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851 || || ||||| || | |||||||| |||| ||||||| | || | ||| Sbjct 2153366 TACGAGAAGTACGAAGCTGAGGGCCGCGGTCGCAAGACACTCAAGGCTCAGAAGCTCTGG 2153307 Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911 | || |||||| || ||| |||||||| | || | |||| |||||||||| Sbjct 2153306 TACGCCATCCTCGAGGCGCAGACCGAGACGGGGAACCCCTTCATGCTCTACAAGGATCAC 2153247 Query 53912 GTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||| |||||||||||||||||| | ||| Sbjct 2153246 TGCAACCGCAAGAGCAACCAGAAGAACTTGGGC 2153214 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||| || || | ||| |||||||||||||| || |||||| |||| | | || Sbjct 2152389 TGCTGATCGCGGCGCCTTCATTGACCAGTCCCAGTCGCTCAACATCCACATGAGGGAGCC 2152330 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 || |||| |||| | | | |||||||| || |||||| || ||||||||||| Sbjct 2152329 GTCTCTGGGCAAGATCACCAGCATGCACTTCGCGGGCTGGAAGCTCGGCCTCAAGACGGG 2152270 Query 55906 TATGTACTATCTGCGGACCC 55925 |||||||| ||||| |||| Sbjct 2152269 GATGTACTACCTGCGCACCC 2152250 Score = 96.9 bits (106), Expect = 4e-15 Identities = 208/307 (68%), Gaps = 17/307 (6%) Strand=Plus/Plus Query 74969 AGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT--CGGGATCCTTGACGAGCTTGTCA 75026 ||||||||| || |||||||| ||| | |||| |||| ||||||| | |||| Sbjct 687758 AGTATCGATGGCCTGGAAGAGA--TGCGTCCTCTGGGCGGGCTCCTTGATGTATGTGTCG 687815 Query 75027 ATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAA 75086 || | || ||||||||||| || || || ||| | | |||| | ||||||| Sbjct 687816 ATGAGGAGAGAGTACGTCTCGGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAG 687875 Query 75087 GACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATA---TTCTCCA 75141 | || ||||| | ||||| || || | |||| | | ||||| ||||| Sbjct 687876 CAGCGGGCCTCGGGGATCTGGACCTCGGCGCTGAA-----CCTCTCGATGAGGTTCTCGT 687930 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 ||||||||||||| ||||||||||| || || || | ||| ||| ||||| | Sbjct 687931 TGACGATGCCGTCTGAGGCGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAACCGCTCGT 687990 Query 75202 CGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 |||| ||||| |||| ||| || | |||||| | | |||||||||||| | | Sbjct 687991 CGTCGGTGAGCTTGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCGGCGG 688050 Query 75259 TCCAGAA 75265 ||||||| Sbjct 688051 TCCAGAA 688057 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 ||||| ||||| || || |||||||| | ||| ||||||| ||||| ||| |||||| Sbjct 687513 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGCACCGCTGAAG 687572 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG 74918 |||||||| ||||| || ||||| || ||||| || ||||| | |||||| Sbjct 687573 AAGATGCCCTCGACGGCGGCGAAGGCCACCAGGCGCTGGGCGAAGGTGGCATCG 687626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215883716600