Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 seq4 89.7 4e-13 >seq1 Length=7551078 Score = 120 bits (132), Expect = 2e-22 Identities = 234/341 (69%), Gaps = 10/341 (3%) Strand=Plus/Plus Query 30121 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCAC 30177 ||||||||| ||| ||||||||||| ||| | || || ||| | || || ||| Sbjct 1537607 GTTCCAGGCCGACATGATGATGCGCCGGTCGTAGGGATTCGTCCGTAGTTTGTGGATCAC 1537666 Query 30178 GGCGTTTTGCA-GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACT 30236 || ||| |||| |||||||| |||| | |||||| | | | || |||| Sbjct 1537667 CTCG----GCAAGCTGGTCCACCCCTTTCCCGGTGTAGTCCGTCTTTGCATCAACATACT 1537722 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 | || || || |||| ||| |||||||| ||||| || || ||||| || | || | || Sbjct 1537723 CGGCACCAAAGTGCCGCCATTGGAACCCATACACGGGGCCTAGGTCGCCGACCTCGCGGT 1537782 Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 || || ||| |||||||| | || | ||| || ||| | ||||||||||| || | Sbjct 1537783 GCGAGAGGCCAACCTTGTCCAGGTACTCGCGGGACCCATTGCCATCCCAGATCTTGACGC 1537842 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCC 30415 | || || |||| | ||||| ||| |||||| | |||||| |||| ||| | Sbjct 1537843 CTTTTTCGCTGAGCGCGATGGAGGAGGTGTTGCCCTCT-ATGAACCAGAGCAACTCGGCG 1537901 Query 30416 ACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || || || ||| | ||||| | ||| || || ||||| || Sbjct 1537902 ACCACAGCTTTCAAGAAGACTCGCTTCGTGGTTAGGAGTGG 1537942 >seq4 Length=3495652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 52716 GACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGAC 52775 ||||||| |||| |||||| || | | ||| | ||| ||| |||| |||||| Sbjct 457283 GACGGCATGAAGTACGTCAAAGTCCGCGTCAGGACGACCAAAATCCCGCAGATTGGCGAC 457342 Query 52776 AAGTTTGCGTCGTTC-ACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACC--CAGGAG 52832 ||||| |||||| | |||| ||||||||| ||| ||| | | | | ||| |||||| Sbjct 457343 AAGTTCGCGTCGCGCCACGG-GCAAAAGGGCACGATCGGCGT-GACGT-ACCGGCAGGAG 457399 Query 52833 GACATGCCCTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTT 52891 |||||||||||| || | || || | || || ||| |||| || ||||| |||||| | Sbjct 457400 GACATGCCCTTC-ACGCGCGAGGGCATCGTTCCGGACATCATTATTAACCCGCACGCCAT 457458 Query 52892 TCCCTCCAGGATGAC 52906 |||||| | ||||| Sbjct 457459 CCCCTCCCGAATGAC 457473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310315817564