Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 109 3e-19 >seq5 Length=3107351 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| || | || | ||| || || |||||| || ||||| ||||| || Sbjct 1009772 CCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 1009831 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| |||| ||||| || || ||||| || || | |||||| || ||||| || Sbjct 1009832 AGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1009891 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| ||| | || ||| || || || ||| | ||||| Sbjct 1009892 ATACCCTCCTTGTC-CTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCAC 1009950 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || || ||||| ||||| || ||||||||| Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCATG 1009999 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | || | ||||||||||||||||| || ||||| ||||| || Sbjct 1009999 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1010058 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || || || ||||| || || | |||||| || ||||| || Sbjct 1010059 GAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1010118 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| |||| || | || ||| | || ||||| | || | Sbjct 1010119 AATGCCCTCCTTGTCTTGGATC-TTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGA 1010177 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | ||| || || || ||||| | || || || || || |||||| Sbjct 1010178 CTTCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1010227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729534791961