Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 3e-19
>seq5
Length=3107351
Score = 109 bits (120), Expect = 3e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||| || | || | ||| || || |||||| || ||||| ||||| ||
Sbjct 1009772 CCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 1009831
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| |||| ||||| || || ||||| || || | |||||| || ||||| ||
Sbjct 1009832 AGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1009891
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| ||| | || ||| || || || ||| | |||||
Sbjct 1009892 ATACCCTCCTTGTC-CTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCAC 1009950
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| || || || || || || ||||| ||||| || |||||||||
Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCATG 1009999
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||| | || | ||||||||||||||||| || ||||| ||||| ||
Sbjct 1009999 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1010058
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || |||| || || || || ||||| || || | |||||| || ||||| ||
Sbjct 1010059 GAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1010118
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| |||| || | || ||| | || ||||| | || |
Sbjct 1010119 AATGCCCTCCTTGTCTTGGATC-TTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGA 1010177
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| | ||| || || || ||||| | || || || || || ||||||
Sbjct 1010178 CTTCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1010227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729534791961
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |