Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq5 120 3e-22
seq1 120 3e-22
seq2 98.7 9e-16
>seq5
Length=3107351
Score = 120 bits (132), Expect = 3e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| | || || || || ||||| |||| || | || || | |||||
Sbjct 1010739 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGTCG 1010680
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || ||||| || ||||| | || | |||||||||
Sbjct 1010679 AAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 1010620
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| || |||| | ||||| ||||||||||| |||||||||||| | |||
Sbjct 1010619 CAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTCAT 1010560
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||| | || | || ||||| ||
Sbjct 1010559 CTTGTTCTCCGCCTTCGTGGTGGTAT 1010534
Score = 111 bits (122), Expect = 1e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|| |||||| || || || || ||||| ||||||||| | || || || ||||| ||| |
Sbjct 1010230 CGGCATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATC 1010171
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|| ||| | || || | ||||| || || |||||||| || ||||| || || ||
Sbjct 1010170 CTCGGACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGA 1010111
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
||| |||||| | || | |||||| || || |||| ||| | || | || |||||
Sbjct 1010110 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTA 1010051
Query 27164 CAACATTCAAAAGGAG 27179
|||||| || ||||||
Sbjct 1010050 CAACATCCAGAAGGAG 1010035
Score = 105 bits (116), Expect = 6e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|| ||||||||| || || || || |||| || ||| |||| || || || |||||| |
Sbjct 1010002 CGGCATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATC 1009943
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|| || | || || | || || |||||||| ||||| || || || || || ||
Sbjct 1009942 CTCAGATACCATCGATAACGTGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGA 1009883
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
||| |||||| | || | |||||| || || | || ||| | ||| | || |||||
Sbjct 1009882 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTA 1009823
Query 27164 CAACATTCAAAAGGAGTCGAC 27184
|||||| || |||||||||||
Sbjct 1009822 CAACATCCAGAAGGAGTCGAC 1009802
>seq1
Length=7551078
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| || || || || || || |||||| | || || || || || || | |
Sbjct 7246547 CCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCT 7246606
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| ||| | || || | ||||| || || || ||||| || ||||| || |||||||
Sbjct 7246607 CGGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATC 7246666
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| ||||| | || | ||||||||| || | || ||| | ||| | ||||| ||||
Sbjct 7246667 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACA 7246726
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||| || |||||||||||| | || | || ||||| |||| |||||
Sbjct 7246727 ACATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775
>seq2
Length=6127077
Score = 98.7 bits (108), Expect = 9e-16
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || ||||| |||||| | || || ||||| || || | |||||| ||||
Sbjct 5085634 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 5085575
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | || || || || || ||||| || ||||| || |||||||||||||| |
Sbjct 5085574 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTC 5085515
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||| ||||| || | || ||| | ||| |||| || ||||||||||| |||
Sbjct 5085514 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAAG 5085455
Query 27177 GAGT 27180
| ||
Sbjct 5085454 GTGT 5085451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918307579840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |