Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq5 120 3e-22 seq1 120 3e-22 seq2 98.7 9e-16 >seq5 Length=3107351 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | || || || || ||||| |||| || | || || | ||||| Sbjct 1010739 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGTCG 1010680 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| || ||||| || ||||| || ||||| | || | ||||||||| Sbjct 1010679 AAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 1010620 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| || |||| | ||||| ||||||||||| |||||||||||| | ||| Sbjct 1010619 CAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTCAT 1010560 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | ||| | || | || ||||| || Sbjct 1010559 CTTGTTCTCCGCCTTCGTGGTGGTAT 1010534 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || || || || ||||| ||||||||| | || || || ||||| ||| | Sbjct 1010230 CGGCATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATC 1010171 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | || || | ||||| || || |||||||| || ||||| || || || Sbjct 1010170 CTCGGACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGA 1010111 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| |||||| | || | |||||| || || |||| ||| | || | || ||||| Sbjct 1010110 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTA 1010051 Query 27164 CAACATTCAAAAGGAG 27179 |||||| || |||||| Sbjct 1010050 CAACATCCAGAAGGAG 1010035 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || |||| || ||| |||| || || || |||||| | Sbjct 1010002 CGGCATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATC 1009943 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | || || | || || |||||||| ||||| || || || || || || Sbjct 1009942 CTCAGATACCATCGATAACGTGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGA 1009883 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| |||||| | || | |||||| || || | || ||| | ||| | || ||||| Sbjct 1009882 TCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTA 1009823 Query 27164 CAACATTCAAAAGGAGTCGAC 27184 |||||| || ||||||||||| Sbjct 1009822 CAACATCCAGAAGGAGTCGAC 1009802 >seq1 Length=7551078 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || || || |||||| | || || || || || || | | Sbjct 7246547 CCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCT 7246606 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 | ||| | || || | ||||| || || || ||||| || ||||| || ||||||| Sbjct 7246607 CGGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATC 7246666 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| | || | ||||||||| || | || ||| | ||| | ||||| |||| Sbjct 7246667 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACA 7246726 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||| || |||||||||||| | || | || ||||| |||| ||||| Sbjct 7246727 ACATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775 >seq2 Length=6127077 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || ||||| |||||| | || || ||||| || || | |||||| |||| Sbjct 5085634 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 5085575 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || || || || || ||||| || ||||| || |||||||||||||| | Sbjct 5085574 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTC 5085515 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| ||||| || | || ||| | ||| |||| || ||||||||||| ||| Sbjct 5085514 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAAG 5085455 Query 27177 GAGT 27180 | || Sbjct 5085454 GTGT 5085451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918307579840