Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=7551078
Score = 95.1 bits (104), Expect = 1e-14
Identities = 267/402 (66%), Gaps = 6/402 (1%)
Strand=Plus/Plus
Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783
|| ||||||||||||| | ||||||| || || ||||||||| |||||
Sbjct 1537544 CGAGACGTAGAATTGGGCAAACATGTGGCAGGGCGGCAGCGCCATCTTGTTCAGATCTGC 1537603
Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843
|||||| || |||| | ||| | | ||| | || ||| | | ||| |||
Sbjct 1537604 AACGTTCCAGGCCGACATGATGATGCGCCGGTCGTAGGGATTCGTCCGTAGTTTGTGGAT 1537663
Query 6844 CACGTACTGCA-GCTGGTCCGCTCCCTGTCCCGAA-TAGTCCG-CTTCGCTCCCCCGATA 6900
||| | | ||| |||||||| | |||| ||||| ||||||| ||| || | | |||
Sbjct 1537664 CACCT-CGGCAAGCTGGTCCAC-CCCTTTCCCGGTGTAGTCCGTCTTTGCATCAAC-ATA 1537720
Query 6901 CTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
||| || |||||||| | ||| |||||||| || || ||||| | |||||| |||| ||
Sbjct 1537721 CTCGGCACCAAAGTGCCGCCATTGGAACCCATACACGGGGCCTAGGTCGCCGACCTCGCG 1537780
Query 6961 AGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020
| || || ||||||||| | || || ||||| | | ||||||||||| ||
Sbjct 1537781 GTGCGAGAGGCCAACCTTGTCCAGGTACTCGCGGGACCCATTGCCATCCCAGATCTTGAC 1537840
Query 7021 CCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080
|| |||| | ||| | ||| ||| | |||||| |||| ||| |
Sbjct 1537841 GCCTTTTTCGCTGAGCGCGATGGAGGAGGTGTTGCCCTCTATGAACCAGAGCAACTCGGC 1537900
Query 7081 GACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|||||| | ||| || | || || ||||| || || || ||
Sbjct 1537901 GACCACAGCTTTCAAGAAGACTCGCTTCGTGGTTAGGAGTGG 1537942
Score = 95.1 bits (104), Expect = 1e-14
Identities = 267/402 (66%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|| || || || ||||| || || | || ||| | ||||||| ||| |||| ||||||
Sbjct 1537942 CCACTCCTAACCACGAAGCGAGTCTTCTTGAAAGCTGTGGTCGCCGAGTTGCTCTGGTTC 1537883
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
| ||| ||| | ||| | |||| || || ||||||||||| |
Sbjct 1537882 ATAGAGGGCAACACCTCCTCCATCGCGCTCAGCGAAAAAGGCGTCAAGATCTGGGATGGC 1537823
Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTG 34402
| ||||| || || | ||||||||| || || | || |||| |||||| |
Sbjct 1537822 AATGGGTCCCGCGAGTACCTGGACAAGGTTGGCCTCTCGCACCGCGAGGTCGGCGACCTA 1537763
Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAG-C 34461
||||| || || |||||||| ||| | |||||||| || |||||| | | || ||| |
Sbjct 1537762 GGCCCCGTGTATGGGTTCCAATGGCGGCACTTTGGTGCCGAGTAT-GTTGATGCAAAGAC 1537704
Query 34462 GGACTA-TTCGGGACAGGGAGCGGACCAGC-TGCAGTACGTGATCGACACCTTGAAGCGG 34519
|||||| ||||| |||| | |||||||| ||| | | |||||| ||| | | |
Sbjct 1537703 GGACTACACCGGGAAAGGG-GTGGACCAGCTTGCCG-AGGTGATCCACAAACTACGGACG 1537646
Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579
|| || | ||| | | ||| | |||| || |||||| ||||| ||||
Sbjct 1537645 AATCCCTACGACCGGCGCATCATCATGTCGGCCTGGAACGTTGCAGATCTGAACAAGATG 1537586
Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCG 34621
||||| || || ||||||| | ||||||||||||| ||
Sbjct 1537585 GCGCTGCCGCCCTGCCACATGTTTGCCCAATTCTACGTCTCG 1537544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262304744240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |