Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 172 1e-37
seq1 158 3e-33
seq2 134 3e-26
seq7 87.8 4e-12
>seq5
Length=3107351
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| |||||||| || |||||||| || || | ||||||| || |||
Sbjct 1010243 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCT 1010302
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || ||||| ||||| || ||||||||||||| || ||||| |||
Sbjct 1010303 TCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 1010362
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| ||| || |||||||| ||||| |||
Sbjct 1010363 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1010422
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || || ||||| ||
Sbjct 1010423 TTGCCGGTAAGGGTCTTGAC 1010442
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| |||||| ||| || |||||||| ||||| | || || | || ||
Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| || || || || || || |||| || ||||||||
Sbjct 1010075 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCT 1010134
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| ||| ||| || || || ||||| |||
Sbjct 1010135 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTC 1010194
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | |||||
Sbjct 1010195 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| || || || || ||||| || |||||||| ||||||| |||||
Sbjct 1009778 CGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTG 1009837
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || |||||||| || |||||||| || || || || || || |||| ||
Sbjct 1009838 CGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCC 1009897
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||| || || |||||||| |||||||| || ||| ||| ||||| ||
Sbjct 1009898 TCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGC 1009957
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||| || || | ||||||
Sbjct 1009958 GTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||| ||||| || ||||| || || ||||| || || | |||||
Sbjct 1010542 ACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGT 1010601
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || || || ||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 1010602 CCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCC 1010661
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || || || |||||||| || || || ||||||||
Sbjct 1010662 CTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAG 1010721
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 1010722 GGTGATGGTCTTGCCGGTGA 1010741
>seq1
Length=7551078
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || | ||||| | || ||
Sbjct 7246760 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 7246701
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || || || || || | || |||||||||
Sbjct 7246700 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCC 7246641
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| ||||| ||| || |||||||| ||||| |||
Sbjct 7246640 TGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 7246581
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| ||||| || || | ||||||
Sbjct 7246580 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549
>seq2
Length=6127077
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || ||||| || || | |||||| | || || || ||||||||||| ||||||||
Sbjct 5085456 TTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 5085515
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| ||||| || || || | || ||||||||||||||||| ||||| || |||
Sbjct 5085516 AGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 5085575
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 5085576 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 5085634
>seq7
Length=2136105
Score = 87.8 bits (96), Expect = 4e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 210932 GATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCG 210991
|||| | |||| || ||||| | | ||| | ||||| || || ||||||||||| ||
Sbjct 1070511 GATGCTGTAATTCGAGAGGGTGCGCCTATCCTAAAGCTGTTTTCCGGCGAAGATAAGACG 1070452
Query 210992 TTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGT 211051
|| || ||||| ||| || || |||||||| ||||| | |||||||| || |||||
Sbjct 1070451 CTGCTGATCAGGGAGAATCCCCTCTTTGTCCTGAATCTTGCGCTTCACGTTGTCAATGGT 1070392
Query 211052 GTCAGAGCTTTCAACCTCGAGAGTGATC 211079
| ||| ||| || || || ||||||
Sbjct 1070391 ATTCGAGGATTCCACTTCCAGCGTGATC 1070364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151747522205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |