Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq5 172 1e-37 seq1 158 3e-33 seq2 134 3e-26 seq7 87.8 4e-12 >seq5 Length=3107351 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || |||||||| || || | ||||||| || ||| Sbjct 1010243 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCT 1010302 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || ||||| ||||| || ||||||||||||| || ||||| ||| Sbjct 1010303 TCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 1010362 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || |||||||| ||||| ||| Sbjct 1010363 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1010422 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || || ||||| || Sbjct 1010423 TTGCCGGTAAGGGTCTTGAC 1010442 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||| ||| || |||||||| ||||| | || || | || || Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || || || || |||| || |||||||| Sbjct 1010075 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCT 1010134 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| ||| ||| || || || ||||| ||| Sbjct 1010135 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTC 1010194 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | ||||| Sbjct 1010195 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || || ||||| || |||||||| ||||||| ||||| Sbjct 1009778 CGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTG 1009837 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || |||||||| || |||||||| || || || || || || |||| || Sbjct 1009838 CGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCC 1009897 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| || || |||||||| |||||||| || ||| ||| ||||| || Sbjct 1009898 TCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGC 1009957 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| || || | |||||| Sbjct 1009958 GTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| ||||| || ||||| || || ||||| || || | ||||| Sbjct 1010542 ACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGT 1010601 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || || || ||||||||||| ||||| || ||||| || ||||| || || | || Sbjct 1010602 CCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCC 1010661 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || || || |||||||| || || || |||||||| Sbjct 1010662 CTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAG 1010721 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 1010722 GGTGATGGTCTTGCCGGTGA 1010741 >seq1 Length=7551078 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 7246760 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 7246701 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || || || || || | || ||||||||| Sbjct 7246700 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCC 7246641 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| || |||||||| ||||| ||| Sbjct 7246640 TGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 7246581 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 7246580 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549 >seq2 Length=6127077 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| || || | |||||| | || || || ||||||||||| |||||||| Sbjct 5085456 TTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 5085515 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| ||||| || || || | || ||||||||||||||||| ||||| || ||| Sbjct 5085516 AGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 5085575 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 5085576 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 5085634 >seq7 Length=2136105 Score = 87.8 bits (96), Expect = 4e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 210932 GATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCG 210991 |||| | |||| || ||||| | | ||| | ||||| || || ||||||||||| || Sbjct 1070511 GATGCTGTAATTCGAGAGGGTGCGCCTATCCTAAAGCTGTTTTCCGGCGAAGATAAGACG 1070452 Query 210992 TTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGT 211051 || || ||||| ||| || || |||||||| ||||| | |||||||| || ||||| Sbjct 1070451 CTGCTGATCAGGGAGAATCCCCTCTTTGTCCTGAATCTTGCGCTTCACGTTGTCAATGGT 1070392 Query 211052 GTCAGAGCTTTCAACCTCGAGAGTGATC 211079 | ||| ||| || || || |||||| Sbjct 1070391 ATTCGAGGATTCCACTTCCAGCGTGATC 1070364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151747522205