Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 1e-18
seq5 86.0 4e-12
>seq1
Length=7551078
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| ||||| || || ||| ||
Sbjct 7246549 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 7246608
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | || || ||||| || || | || || |||||
Sbjct 7246609 GACACTATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCA 7246667
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || |||||||| || || || |||| ||||| | ||| |||||
Sbjct 7246668 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 7246727
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 7246728 CATCCAGAAGGAGTCGAC 7246745
>seq5
Length=3107351
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || ||||| || || || ||||| || ||||| || ||| ||
Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || || |||||
Sbjct 1010166 GACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAG 1010107
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || ||||| || || ||||| |||| ||||| | |||||||||
Sbjct 1010106 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAAC 1010047
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 1010046 ATCCAGAAGGAG 1010035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009529968636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |