Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 6e-29
seq1 123 6e-23
seq2 116 9e-21
>seq5
Length=3107351
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||||||| || || |||| |||||||| | | || | || ||
Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || || || || ||||| || |||||||||
Sbjct 1010075 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCT 1010134
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| |||| ||| || |||| ||||| |||
Sbjct 1010135 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTC 1010194
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | ||| | ||||||
Sbjct 1010195 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226
Score = 114 bits (126), Expect = 3e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || ||||| || || || || || || || | ||||| |||| || ||
Sbjct 1010542 ACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGT 1010601
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || ||||| || || || || ||||||||||| || ||
Sbjct 1010602 CCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCC 1010661
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| ||| |||||||| || || | ||||| || |
Sbjct 1010662 CTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAG 1010721
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 1010722 GGTGATGGTCTTGCCGGT 1010739
>seq1
Length=7551078
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || |||||||| || || || || |||| ||||| |||| | ||
Sbjct 7246769 CGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 7246710
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || |||||||| || || || || ||||| || || ||
Sbjct 7246709 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCC 7246650
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| ||| ||||| ||||| |||| || || || |
Sbjct 7246649 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGG 7246590
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||| | || || | ||| | |||||
Sbjct 7246589 GTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549
>seq2
Length=6127077
Score = 116 bits (128), Expect = 9e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| ||||||||||| || || ||||| ||||| || || || |||
Sbjct 5085486 CCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGATCGGGGGGGATGCCCTCC 5085545
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| ||||| ||||| |||| || || || | |||
Sbjct 5085546 TTGTCCTGGATCTTGGACTTCACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTG 5085605
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| ||||||||||||| || || | |||
Sbjct 5085606 ATGGTCTTGCCCGTCAGGGTCTTCACGAA 5085634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530940251798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |