Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 seq4 86.0 5e-12 >seq1 Length=7551078 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||| |||||||| ||||| || || ||||| || | || | |||| || | Sbjct 1537731 AAGTGCCGCCATTGGAACCCATACACGGGGCCTAGGTCGCCGACCTCGCGGTGCGAGAGG 1537790 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||||| | || | ||| || ||| | ||||||||||| || || || ||| Sbjct 1537791 CCAACCTTGTCCAGGTACTCGCGGGACCCATTGCCATCCCAGATCTTGACGCCTTTTTCG 1537850 Query 30137 GAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 |||| | ||||| ||| |||||| | |||||| |||| ||| | || || || Sbjct 1537851 CTGAGCGCGATGGAGGAGGTGTTGCCCTCT-ATGAACCAGAGCAACTCGGCGACCACAGC 1537909 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||| | ||||| | ||| || || ||||| || Sbjct 1537910 TTTCAAGAAGACTCGCTTCGTGGTTAGGAGTGG 1537942 >seq4 Length=3495652 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 53480 GACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGAC 53539 ||||||| |||| |||||| || | | ||||| ||| ||| |||| |||||| Sbjct 457283 GACGGCATGAAGTACGTCAAAGTCCGCGTCAGGACGACCAAAATCCCGCAGATTGGCGAC 457342 Query 53540 AAGTTTGCATC-CTTCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAG 53596 ||||| || || | ||||| ||||||||| || ||| | | || | | | ||||| Sbjct 457343 AAGTTCGCGTCGCGCCACGG-GCAAAAGGGCACGATCGGCGTGACGTACCGGC--AGGAG 457399 Query 53597 GACATGCCCTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTT 53655 |||||||||||| || | || || | || || ||| |||| || ||||| |||||| | Sbjct 457400 GACATGCCCTTC-ACGCGCGAGGGCATCGTTCCGGACATCATTATTAACCCGCACGCCAT 457458 Query 53656 TCCCTCCAGGATGACG 53671 |||||| | |||||| Sbjct 457459 CCCCTCCCGAATGACG 457474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163115848062