Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
seq4 86.0 5e-12
>seq1
Length=7551078
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||| |||||||| ||||| || || ||||| || | || | |||| || |
Sbjct 1537731 AAGTGCCGCCATTGGAACCCATACACGGGGCCTAGGTCGCCGACCTCGCGGTGCGAGAGG 1537790
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| |||||||| | || | ||| || ||| | ||||||||||| || || || |||
Sbjct 1537791 CCAACCTTGTCCAGGTACTCGCGGGACCCATTGCCATCCCAGATCTTGACGCCTTTTTCG 1537850
Query 30137 GAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195
|||| | ||||| ||| |||||| | |||||| |||| ||| | || || ||
Sbjct 1537851 CTGAGCGCGATGGAGGAGGTGTTGCCCTCT-ATGAACCAGAGCAACTCGGCGACCACAGC 1537909
Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
||| | ||||| | ||| || || ||||| ||
Sbjct 1537910 TTTCAAGAAGACTCGCTTCGTGGTTAGGAGTGG 1537942
>seq4
Length=3495652
Score = 86.0 bits (94), Expect = 5e-12
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 53480 GACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGAC 53539
||||||| |||| |||||| || | | ||||| ||| ||| |||| ||||||
Sbjct 457283 GACGGCATGAAGTACGTCAAAGTCCGCGTCAGGACGACCAAAATCCCGCAGATTGGCGAC 457342
Query 53540 AAGTTTGCATC-CTTCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAG 53596
||||| || || | ||||| ||||||||| || ||| | | || | | | |||||
Sbjct 457343 AAGTTCGCGTCGCGCCACGG-GCAAAAGGGCACGATCGGCGTGACGTACCGGC--AGGAG 457399
Query 53597 GACATGCCCTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTT 53655
|||||||||||| || | || || | || || ||| |||| || ||||| |||||| |
Sbjct 457400 GACATGCCCTTC-ACGCGCGAGGGCATCGTTCCGGACATCATTATTAACCCGCACGCCAT 457458
Query 53656 TCCCTCCAGGATGACG 53671
|||||| | ||||||
Sbjct 457459 CCCCTCCCGAATGACG 457474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163115848062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |