Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 111 4e-19 seq1 104 5e-17 >seq5 Length=3107351 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || |||||||||||||| | | || | ||| || Sbjct 1009787 AGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCC 1009846 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | |||||| |||| | || || ||||| | Sbjct 1009847 TCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGT 1009904 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | |||||||| || || | || | | | ||||| || || || || || |||| Sbjct 1009905 CCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAG 1009964 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || | ||||||||||||| |||||| Sbjct 1009965 TCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998 Score = 105 bits (116), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| ||| || |||||||||||||| | | || | || || Sbjct 1010015 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCC 1010074 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | |||||| |||| | || || ||||| | Sbjct 1010075 TCCAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGT 1010132 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || ||||| | || | | |||| || || ||||| || || || | Sbjct 1010133 CTTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGG 1010192 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||||||| ||||||| ||||| Sbjct 1010193 TCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||||||||| || ||||| || || |||||||| |||| | || | || || Sbjct 1010551 GAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTC 1010610 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || |||||||| || || | ||||||||| | || ||| || ||||| || Sbjct 1010611 CTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 1010670 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | | | || || ||| || || || || || || Sbjct 1010671 CTGAATCTTCGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGT 1010730 Query 152072 TTTGCCCGTGA 152082 ||||| |||| Sbjct 1010731 CTTGCCGGTGA 1010741 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || ||||| || ||||| || ||||||||||| |||| | || | Sbjct 1010236 GAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCG 1010295 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || || ||||| || | ||||||||| | | || || || Sbjct 1010296 GCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTC 1010355 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| || ||| || || || || Sbjct 1010356 CTTATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGT 1010415 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || ||||| || || ||||| |||| Sbjct 1010416 GATGGTCTTGCCGGTAAGGGTCTTGACGA 1010444 >seq1 Length=7551078 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| |||| | || | || || Sbjct 7246760 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 7246701 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | ||| || ||||| || Sbjct 7246700 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTTGTCC 7246641 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | |||| || ||| || || || || || || Sbjct 7246640 TGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 7246581 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 7246580 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820548683407