Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 5e-30
seq1 138 3e-27
seq7 102 2e-16
>seq5
Length=3107351
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || || || ||||| || ||||||||| ||||||
Sbjct 1009995 CAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCAGAT 1009936
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || ||||||||||| || || || || ||||| |||||
Sbjct 1009935 ACCATCGATAACGTGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAGCAG 1009876
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || || || | || || | ||||| ||| ||
Sbjct 1009875 CGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAACATC 1009816
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || |||||||| ||
Sbjct 1009815 CAGAAGGAGTCGACGCTGCATCTCGT 1009790
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| || || || |||||||| || || ||| ||| |||
Sbjct 1010223 CAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCGGAC 1010164
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| || || || || ||||| |||||
Sbjct 1010163 ACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAGCAG 1010104
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || || || | || || | ||||| ||| ||
Sbjct 1010103 CGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAACATC 1010044
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 1010043 CAGAAGGA 1010036
Score = 136 bits (150), Expect = 1e-26
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || ||||||||||||||||| || || |||||||| || |||||
Sbjct 1010741 TCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGT 1010682
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| || || ||||| || |||||||| || || || |||||||| |
Sbjct 1010681 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 1010622
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || |||| || |||| || ||| | || || || || || || |
Sbjct 1010621 AGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTC 1010562
Query 178123 ATCTTGTT 178130
||||||||
Sbjct 1010561 ATCTTGTT 1010554
Score = 125 bits (138), Expect = 2e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || || || || |||||||||||||| || ||| ||||| ||||
Sbjct 1010444 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACGATCG 1010385
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| ||||| || || || || ||||| |||||||| || || |
Sbjct 1010384 ACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTGA 1010325
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || || || || || ||||| || |||| || |||| || ||| |||| || |
Sbjct 1010324 TCTTTGCTGGCAAGCAACTTGAAGACGGCCGGACCCTGTCCGACTACAACATCCAGAAGG 1010265
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || || ||
Sbjct 1010264 AGTCCACCCTTCACCTCGT 1010246
>seq1
Length=7551078
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||||||||| || ||| |||
Sbjct 7246552 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGAC 7246611
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || || ||||| || || |||||
Sbjct 7246612 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAGCAG 7246671
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || |||| || ||| ||
Sbjct 7246672 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 7246731
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 7246732 CAGAAGGAGTCGACCCTCCACCTCGT 7246757
>seq7
Length=2136105
Score = 102 bits (112), Expect = 2e-16
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 177956 GATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGA 178015
|||||| || || |||||| ||| | ||||| || ||||| || | |||||||||||
Sbjct 1070364 GATCACGCTGGAAGTGGAATCCTCGAATACCATTGACAACGTGAAGCGCAAGATTCAGGA 1070423
Query 178016 CAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069
|||||| || || | || || ||||| || |||||||||||||||||||||||
Sbjct 1070424 CAAAGAGGGGATTCTCCCTGATCAGCAGCGTCTTATCTTCGCCGGAAAACAGCT 1070477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730937812298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |