Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 147 5e-30 seq1 138 3e-27 seq7 102 2e-16 >seq5 Length=3107351 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||| || ||||||||| |||||| Sbjct 1009995 CAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCAGAT 1009936 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || || ||||||||||| || || || || ||||| ||||| Sbjct 1009935 ACCATCGATAACGTGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAGCAG 1009876 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||| || || || | || || | ||||| ||| || Sbjct 1009875 CGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAACATC 1009816 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||||||| || Sbjct 1009815 CAGAAGGAGTCGACGCTGCATCTCGT 1009790 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| || || || |||||||| || || ||| ||| ||| Sbjct 1010223 CAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCGGAC 1010164 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| || || || || ||||| ||||| Sbjct 1010163 ACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAGCAG 1010104 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||| || || || | || || | ||||| ||| || Sbjct 1010103 CGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAACATC 1010044 Query 178104 CAAAAAGA 178111 || || || Sbjct 1010043 CAGAAGGA 1010036 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||||||||||||||| || || |||||||| || ||||| Sbjct 1010741 TCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGT 1010682 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || ||||| || |||||||| || || || |||||||| | Sbjct 1010681 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 1010622 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || |||| || |||| || ||| | || || || || || || | Sbjct 1010621 AGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTC 1010562 Query 178123 ATCTTGTT 178130 |||||||| Sbjct 1010561 ATCTTGTT 1010554 Score = 125 bits (138), Expect = 2e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||||||||| || ||| ||||| |||| Sbjct 1010444 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACGATCG 1010385 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| ||||| || || || || ||||| |||||||| || || | Sbjct 1010384 ACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGCCTGA 1010325 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| || || || || || ||||| || |||| || |||| || ||| |||| || | Sbjct 1010324 TCTTTGCTGGCAAGCAACTTGAAGACGGCCGGACCCTGTCCGACTACAACATCCAGAAGG 1010265 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 1010264 AGTCCACCCTTCACCTCGT 1010246 >seq1 Length=7551078 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||||||||| || ||| ||| Sbjct 7246552 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGAC 7246611 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || || ||||| Sbjct 7246612 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAGCAG 7246671 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || |||| || ||| || Sbjct 7246672 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 7246731 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 7246732 CAGAAGGAGTCGACCCTCCACCTCGT 7246757 >seq7 Length=2136105 Score = 102 bits (112), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 177956 GATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGA 178015 |||||| || || |||||| ||| | ||||| || ||||| || | ||||||||||| Sbjct 1070364 GATCACGCTGGAAGTGGAATCCTCGAATACCATTGACAACGTGAAGCGCAAGATTCAGGA 1070423 Query 178016 CAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069 |||||| || || | || || ||||| || ||||||||||||||||||||||| Sbjct 1070424 CAAAGAGGGGATTCTCCCTGATCAGCAGCGTCTTATCTTCGCCGGAAAACAGCT 1070477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730937812298