Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 167 2e-36 seq5 158 1e-33 seq2 127 2e-24 >seq1 Length=7551078 Score = 167 bits (184), Expect = 2e-36 Identities = 176/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||| || || || || ||||||||| ||||| ||||||||| Sbjct 7246775 CCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 7246716 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||| || || | ||| Sbjct 7246715 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGG 7246656 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||| ||||| | Sbjct 7246655 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATAGTGTCCGAGGACTCGA 7246598 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 7246597 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 7246548 >seq5 Length=3107351 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || | || ||||||||||| ||||||||| ||||| || || ||| Sbjct 1009772 CCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 1009831 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| |||| || |||||||| |||||||| || || ||||| || |||| |||| Sbjct 1009832 AGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1009891 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||||| |||| ||| | | || || || ||||| Sbjct 1009892 ATACCCTCCTTGTCCTGAATTTTGCTCTTC-ACGTTATCGATGGTATCTGAGGATTCCAC 1009950 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || || |||| |||||| ||||| ||||||||| Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCATG 1009999 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || || || |||||||||||||| ||||| || || || Sbjct 1009999 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 1010058 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| || |||||||| |||||||| || || ||||| || |||| ||| Sbjct 1010059 GAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1010118 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || ||||||||| ||| || ||| ||| | | | ||||| || || | Sbjct 1010119 AATGCCCTCCTTGTCTTGGATCTTGGACTT-GACGTTGTCGATGGTGTCCGAGGATTCGA 1010177 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || || || || || || ||||| ||||| || |||||| Sbjct 1010178 CTTCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1010227 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || || || || ||| ||||||||| ||||| |||||||| Sbjct 1010227 GCCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1010286 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| || || |||||||| || || ||||||||||| ||||| | || Sbjct 1010287 CAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 1010346 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||| ||| ||| || ||| ||| | | | |||||| ||||| | Sbjct 1010347 AATGCCCTCCTTATCCTGGATCTTCGACTT-GACGTTGTCGATCGTGTCGGAGGACTCGA 1010405 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || || || || ||||| |||| Sbjct 1010406 CCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 1010444 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||||||| |||||||| Sbjct 1010537 CCACCACGAAGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1010596 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||||||||| ||||||||||| ||||| | || Sbjct 1010597 AGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 1010656 Query 41756 ACGCTCTCCTTGTCC 41770 | || |||||||||| Sbjct 1010657 ATGCCCTCCTTGTCC 1010671 >seq2 Length=6127077 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| ||||| || ||||| || |||| |||||||||||||| ||||| | Sbjct 5085454 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 5085513 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | ||||||||||| || | ||| | || |||||||||| ||| || |||| || | Sbjct 5085514 TGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC-ACATTG 5085572 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||| ||||| ||||| | || || || || |||||||| ||||| ||| Sbjct 5085573 TCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 5085632 Query 41852 AA 41853 || Sbjct 5085633 AA 5085634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303901760400