Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beauveria_20rudraprayagi_20[genbank_20GCA_5F000733645.1_202014-07- 25] 4,708 sequences; 36,589,529 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 9e-16 seq4308 93.3 4e-14 >seq11 Length=68403 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||| || || || | || || ||||| ||||| ||||| Sbjct 53086 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 53027 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | || ||| |||||| ||| ||| |||| ||| Sbjct 53026 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 52968 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || ||| |||||||| || | |||||| | || |||||||| || || | Sbjct 52967 TGTCAATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTGA 52908 Query 39272 CAAAGATTTGCATCTT 39287 | || || |||||||| Sbjct 52907 CGAAAATCTGCATCTT 52892 >seq4308 Length=84132 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || || || || || || |||||| || || || |||| || Sbjct 25102 ACCAAGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCGTCTTCC 25043 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| || |||||||||||||| | ||| | | ||| |||||| Sbjct 25042 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGA 24983 Query 39196 ATTTTCTGTTTGAGCGTCGCCAC-CGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| ||||| ||| | || ||| || ||||| || |||| ||| || | || Sbjct 24982 ATCTTCGATTTGA-CGTTGTCAATCGTGTCCGAAGACTCGACTTCCAGCGTAATGGTCTT 24924 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||||||||| Sbjct 24923 GCCGGTAAGTGTCTTGACAAAGATTTGCAT 24894 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || |||||||| || || || || |||||| | || || | || || Sbjct 25330 ACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGCTCAAAGTGCGACCATCTTCC 25271 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| || | |||||||||||| | || | || || |||||| | Sbjct 25270 AGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 25211 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| | | | || || ||||| || |||| || || | ||| Sbjct 25210 ATCTTGGACTTGACATTGTCAATGGTGTCCGAAGACTCGACTTCCAAAGTAATCGTCTTT 25151 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || |||||||||||||| Sbjct 25150 CCAGTCAGAGTCTTGACAAAGATTTGCAT 25122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429520953210404