Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 100 6e-16 >seq1 Length=5232100 Score = 100 bits (110), Expect = 6e-16 Identities = 184/265 (69%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 230376 GGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTAT 230435 |||| | || ||||| || || || || | | ||| | |||||| | || || | Sbjct 3073284 GGTCGAGCACATCATCACCGAGGCGGTCAAGATCGAGCAAGAGTTCCTCACCGAGGCACT 3073225 Query 230436 TCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 || || ||| || | || |||||| ||| || ||| | || |||||||| ||||| | Sbjct 3073224 GCCTTG-CGCGCTGCTCGGTATGAACTCTGGTCTGATGTGCCAATACATCGAGTTCGTCG 3073166 Query 230495 CCGACCGCAT--TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTT 230552 |||||||| | | |||| | || || | || || |||||| | | |||||||| Sbjct 3073165 CCGACCGCCTGCTATTGT--CTCTCGGCAATCCCAAGGTTTACAACGCCACCAACCCCTT 3073108 Query 230553 TGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAG 230612 | || |||||| ||| || | || ||||||||||||||||| ||||| ||| | Sbjct 3073107 CGACTTCATGGAGAACATCTCCTTGGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGG 3073048 Query 230613 TGACTATCAGAGGCCTGGTGTGATG 230637 |||||| |||| | |||| || ||| Sbjct 3073047 TGACTACCAGAAGTCTGGCGTCATG 3073023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823322331500