Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
>seq1
Length=5232100
Score = 93.3 bits (102), Expect = 4e-14
Identities = 180/264 (68%), Gaps = 9/264 (3%)
Strand=Plus/Plus
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|||| | || ||||| |||||||| || ||||| || |||||||||||||| |||||
Sbjct 3073673 GTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCCTC 3073732
Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| ||||||||| || || ||| || || |||| ||||| || ||||| |||||
Sbjct 3073733 TGGTATTTGTACCTCGCCGCTAAAGCGCTCGACCAGATTCTCGTTGACGATGCCGTCGGA 3073792
Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATA---TTTTTCGTCAGATGTAAG--- 16668
||| || || || || | | ||| |||||| | | |||||| | ||
Sbjct 3073793 TGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTCATCGTCA---TTGAGCCT 3073849
Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728
| | ||| || | | |||||||| | ||| | ||||| | ||||| ||| |||
Sbjct 3073850 CTTGTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAAGC 3073909
Query 16729 CACTGCCTTTTTATACATTTTCCA 16752
| ||||| || ||||||| |||
Sbjct 3073910 TTCGGCCTTCTTGTACATTTGCCA 3073933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414080366000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |