Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq4 185 1e-41
>seq4
Length=3241893
Score = 185 bits (204), Expect = 1e-41
Identities = 570/869 (66%), Gaps = 12/869 (1%)
Strand=Plus/Plus
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
||||||||||| | ||| ||||| | | |||||| |||| |||| ||| || |||||
Sbjct 827273 CCAGGACATTCGTTCGGGCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATG 827332
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
|| || || |||||||| | || ||||| || | | | | ||| || || ||
Sbjct 827333 AACAGGTCCGGAATCCACAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCA 827392
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
|||||| || || ||||| | | || || | ||||| || |||| ||| |||
Sbjct 827393 TGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATG 827452
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | || || |||||||| || || ||||| | || |||||||| || || ||
Sbjct 827453 GCAAACGCACCTGGGCGTTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAG 827512
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | | ||| || || | ||| || || | ||||| || || || ||| ||
Sbjct 827513 ACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCG 827572
Query 54281 CTGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338
| |||||||| | ||| ||||| || || ||||| |||| ||||| | |
Sbjct 827573 GTAGCACGAATCCGGTGGACATT--CAGACCAATACCGCCTGCGGTTTTGGAGATCATGG 827630
Query 54339 CGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|||| ||| || | || |||||||||||||| || || || ||| |||| | | ||
Sbjct 827631 CGCA-CGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGG 827689
Query 54398 AAACAGCTAGACATTTGGTGACGA-CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 54456
|| ||| ||||||||| | ||| || |||||||| || | ||| || ||||||||
Sbjct 827690 AAGCAGGAGGACATTTGG-GGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTG 827748
Query 54457 CGTAAACCA-TTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT 54515
|| || | || || | ||| |||||| ||||| || || || || ||
Sbjct 827749 TGTGAAGTACTTGCTCGACATGTA-ATTGTATGTCTCAATTGCCTTATCGATGTCTTCGC 827807
Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575
||| || || || | |||||||| | |||||| || || | || | || |||| ||
Sbjct 827808 CATGTATGCCGACGGACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGT 827867
Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635
|||| || | ||| || ||| | ||| || ||||| || | | ||| ||||
Sbjct 827868 TTATGCGGAGGAGGTATGAGCGTTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGT 827927
Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695
| || ||||| | ||| | |||||||| | || | ||| | || | | | | |
Sbjct 827928 CGCGATCGTAGACGATAGCGGAGTTGAGATCGTCAGCGTGTTTCATGACGATGT-CGTAG 827986
Query 54696 TAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAA 54754
|| ||||||| ||||| || ||||| || || |||||||| || | |
Sbjct 827987 ACCGACTTTGAAATCATCGGCTGGCTCTTGCCATTCTTTGGGTTGACATAATTGTAGAGG 828046
Query 54755 TCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATT 54814
|| | | || | ||| | ||||| |||| |||||| ||||| || || || ||
Sbjct 828047 TCTTGTACGACAACCGAGAATTGCTTTTTGGTTTGTTTGTGGAGATTCGAGACAGCGATA 828106
Query 54815 CTAGCGGCTAGAATGGCATAATCCGGATG 54843
| || || || |||||||| || |||||
Sbjct 828107 CGTGCTGCGAGGATGGCATATTCGGGATG 828135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721228924000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |