Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 140 3e-28
seq7 93.3 4e-14
>seq3
Length=4703234
Score = 140 bits (154), Expect = 3e-28
Identities = 156/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||||||||| || || |||||||| ||| | ||||| ||||||||||||
Sbjct 3808253 GTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTG 3808194
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| ||||||| ||||| ||||| ||||| |||||||||||||| || ||
Sbjct 3808193 CTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 3808134
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713
|| || | |||| ||| |||| || | || ||||||| || | ||| |||||||
Sbjct 3808133 CGACTTCACGTTGTCGATGGTATCCGATGAT-TCCACCTCGAGCGTGATCGTCTTGCCGG 3808075
Query 118714 TCAGAGTTTTTACAAAAATCTGCATG 118739
||| || || || || |||||||||
Sbjct 3808074 TCAAGGTCTTGACGAAGATCTGCATG 3808049
Score = 132 bits (146), Expect = 4e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||||| | | ||||||||| | || ||||| || || |||||||| |||
Sbjct 3808506 TACCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3808447
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || || |||||||| || || ||| ||||||||||||| ||||| ||||
Sbjct 3808446 AGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAG 3808387
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| |||||||||||||| ||| || || || | || | ||| |||| || | ||
Sbjct 3808386 GAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGAT-TCA 3808328
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || | ||| |||||||||| || || || || ||||||||
Sbjct 3808327 ACCTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || || || || ||||||||||||||| | ||| || || ||
Sbjct 3808943 CACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTC 3808884
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 3808883 GAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 3808824
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| || ||||||||||| || | || ||
Sbjct 3808823 GATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTT 3808764
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||||||| || || || || |||||
Sbjct 3808763 GCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | | ||||||||| | || ||||| || || |||||||| ||||
Sbjct 3808734 TACCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGC 3808675
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
||| || || |||||| ||||| ||||| ||| ||||||||||||| ||||| || |
Sbjct 3808674 TCAACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGG 3808615
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| |||||||||||||| || || || || | |||| || || | || | ||
Sbjct 3808614 GGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGAT-TCA 3808556
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || | || |||||||| || || || || ||||| |||||
Sbjct 3808555 ACCTCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
Score = 82.4 bits (90), Expect = 7e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 3808018 GTCGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 3807959
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | |||||||| || || || |||||||||||||| || || ||
Sbjct 3807958 GCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 3807899
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| | |||| ||||| | | ||| ||||||| ||| | || ||||||||
Sbjct 3807898 ACATTGTCGATTGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 3807846
>seq7
Length=3010262
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||||||||| | ||||| ||||||||||| || ||
Sbjct 2377842 GTCGACTCCTTCTGGATGTTGTAATCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCC 2377901
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||||||||||| || ||||| || ||||| || |||||
Sbjct 2377902 GCGAAGATGAGACGCTGTTGGTCGGGGGGGATGCCTTCTTTGTC 2377945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830135634600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |