Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 3e-27
seq8 82.4 5e-11
>seq3
Length=4703234
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| ||||| | ||||||| ||| | || ||| ||||| |||||||| |||||
Sbjct 3808961 TCCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGA 3808902
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| || | ||||||||| ||||| ||||||||||||||||| ||
Sbjct 3808901 GAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGG 3808842
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | | | | || | ||| | || |||||
Sbjct 3808841 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGAC 3808782
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| ||||| |||||||| ||||| || || ||||| |||||
Sbjct 3808781 CTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||| ||||| || || ||||| ||||||||||||||
Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||| ||||| ||||| || || ||
Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | ||| | ||||| ||
Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || |||||||||||
Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | ||||||| ||| | || || ||||| |||||||||||| |
Sbjct 3808732 CCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3808673
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | |||| | || || | |||||| || ||||| ||||| ||||| || || |||
Sbjct 3808672 AACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGG 3808613
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | ||||| ||||| ||
Sbjct 3808612 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACC 3808553
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| ||||| |||||||| || || || || || || |||||
Sbjct 3808552 TCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| || ||||| |||||||||||||| || ||| | ||
Sbjct 3808261 AGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCC 3808202
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| ||||| ||||| || || || | || |||||||||
Sbjct 3808201 TCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCC 3808142
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | ||| | ||||| || || | |||||| ||
Sbjct 3808141 TGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTC 3808082
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| | || || || |||||||||||
Sbjct 3808081 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
Score = 98.7 bits (108), Expect = 6e-16
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | ||| || ||||| ||||||||||||||
Sbjct 3808048 CCACCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAT 3807989
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
|| ||| | || |||| ||||||||| ||||| || | |||||||||| || ||||
Sbjct 3807988 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 3807929
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | | || | || | || || ||
Sbjct 3807928 -ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATTGTGTCAGAGGACTCCAC 3807870
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 3807869 CTCGAGGGTGATGGTCTTGCCGGTGA 3807844
>seq8
Length=2851179
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | || || ||||| | || || ||||| ||||||||||||||
Sbjct 895293 TCCTCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 895234
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| |||| |||||| || ||||| || | ||||||||||| |||
Sbjct 895233 AAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 895174
Query 34282 CACGCTCTCCTTGTC 34296
| || |||||||||
Sbjct 895173 AATGCCCTCCTTGTC 895159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071803128000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |