Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
seq8 89.7 4e-13
>seq3
Length=4703234
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||||||||||||||||| ||| || || |||| ||
Sbjct 3808942 ACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCG 3808883
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | |||||| ||||| || || | ||||||||||||
Sbjct 3808882 AGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGG 3808823
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||||| ||||||
Sbjct 3808822 ATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTTG 3808763
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||||||||| || |||||||||||
Sbjct 3808762 CCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 3808486 ACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCG 3808427
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | |||||||| || ||||| | |||||||||||| |
Sbjct 3808426 AGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGA 3808367
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||| || ||||| | ||||||||||||
Sbjct 3808366 ATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACCTCGAGCGTAATCGTCTTG 3808307
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| || ||||| |||||
Sbjct 3808306 CCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 82.4 bits (90), Expect = 6e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| | || ||||| || || ||||||||
Sbjct 3808013 CTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 3807954
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||| ||||| || || | ||||||||||||
Sbjct 3807953 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 3807914
>seq8
Length=2851179
Score = 89.7 bits (98), Expect = 4e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| ||||| || |||||||||||
Sbjct 895257 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAA 895198
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
||||| ||||| ||||| || || | |||||||||||
Sbjct 895197 GATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 895159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074959251050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |