Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 8e-17
seq7 86.0 6e-12
>seq3
Length=4703234
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| ||||| || | ||| | || ||||| | || || || || |||||||| ||||||
Sbjct 3808963 TGTCCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCG 3808904
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| || | |||||||||||| || || || |||| || || ||||| || ||
Sbjct 3808903 GAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGT 3808844
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| ||||| || ||||| ||| || || | | || | |||||| ||| |||
Sbjct 3808843 GGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCG 3808784
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | || | ||||||||||||| || || ||||| |||||||||
Sbjct 3808783 ACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCATA 3808733
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| ||| | || ||||| | || ||||| || || ||||| || |||
Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | |||||||||||| || || || |||| ||||| || ||||| |||||
Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | || | | || | || || | | || ||
Sbjct 3808384 ATGCCCTCCTTGTC-CTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAAC 3808326
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| | || | ||||||||||||||| || || ||||| || ||||||
Sbjct 3808325 CTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 3808277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || ||||||| || ||||| || || ||||| || ||||||
Sbjct 3808732 CCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3808673
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | || || ||||| || || || |||| ||||| || ||||| || ||
Sbjct 3808672 AACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGG 3808613
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | || |||| | || |||
Sbjct 3808612 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACC 3808553
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||||||||| | ||| || ||||| |||||||||
Sbjct 3808552 TCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCATA 3808505
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|||||||| || || ||||| || ||| | |||| || |||||||| || |||
Sbjct 3808246 GTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 3808187
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||| || || || ||||| ||||| ||||| || ||||| ||| || ||
Sbjct 3808186 GCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTC 3808127
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | || || | | |||||||| | || | ||||||||||||||| ||
Sbjct 3808126 ACGTTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTC 3808067
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 3808066 TTGACGAAGATCTGCAT 3808050
>seq7
Length=3010262
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
|||||| || | ||| | || | || | ||| ||||| || || ||||| ||||||||
Sbjct 2377811 GCCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCT 2377870
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| |||| ||| |||||||| || || || |||| ||||| || || ||||| ||
Sbjct 2377871 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGG 2377930
Query 139657 TATGCCTTCTTTGTC 139671
||||||||||||||
Sbjct 2377931 GATGCCTTCTTTGTC 2377945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063689960000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |