Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 185 1e-41
>seq4
Length=3241893
Score = 185 bits (204), Expect = 1e-41
Identities = 588/899 (65%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|||||||| || || || | | ||| ||||||||||| ||||| ||||| | || |
Sbjct 827243 TCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGTC 827302
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
||||| || | || | || || ||||| || || || |||||||| | || ||||
Sbjct 827303 CACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAAT 827362
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
| || | | | | || || || || |||||| || || ||||| | | |
Sbjct 827363 AAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAA 827422
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
| || | ||||| || |||| ||| ||||| | | || || |||||||| || ||
Sbjct 827423 ACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCT 827482
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
||||| | || |||||||| || || || || | | ||| || || | ||| || ||
Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGAC 72301
| ||||| || || || ||| || | |||||||| || ||| | |||
Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCA--GAC 827600
Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCC 72360
| || || ||||| |||| ||||| | ||||| ||| || | || ||||||||||||
Sbjct 827601 CAATACCGCCTGCGGTTTTGGAGATCATGGCGCA-CGTCTTCAGTGTGTCATAGATGCCC 827659
Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGT 72419
|| || || || ||| |||| | | || || ||| ||||||||| | ||| ||
Sbjct 827660 TCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGG-GGCGATGGGGT 827718
Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGT 72478
|||||||| || | ||| || |||||||| || || | || |||| ||| |||||
Sbjct 827719 CCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACATGTA-ATTGT 827777
Query 72479 ACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACA 72538
| |||||||| || || || || |||||| || || | |||||||| | ||
Sbjct 827778 ATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGCA 827837
Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598
| || || || | || | || |||| ||||| | | ||| || ||| | ||
Sbjct 827838 TGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGAG 827897
Query 72599 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658
| || ||||| || | | ||| ||||| || ||||| | ||| | || ||||| |
Sbjct 827898 TCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGAGTTGAGAT 827957
Query 72659 TATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATGTTTC 72717
|| | ||| | || || | | | | || ||||||| ||||| ||
Sbjct 827958 CGTCAGCGTGTTTCATGACGATGT-CGTAGACCGACTTTGAAATCATCGGCTGGCTCTTG 828016
Query 72718 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 72777
||||| || || || ||||| ||| | | || | | || | ||| | |||||
Sbjct 828017 CCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTGCTTTTTG 828076
Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|||| ||||| ||||| || || || || | || || || |||||||| || |||||
Sbjct 828077 GTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTCGGGATG 828135
Score = 140 bits (154), Expect = 4e-28
Identities = 358/540 (66%), Gaps = 9/540 (2%)
Strand=Plus/Plus
Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847
||||| ||| | || ||||| ||||||| || || || |||| || || ||||||||
Sbjct 826029 TTCCTGGTCGACAGTGAACTGGATGGGAGCAGAAGCCGCCATCGTTCGAAGGTAGTACAT 826088
Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907
||| || || |||||||| |||| || ||| |||||| || | ||| | |
Sbjct 826089 GCCCGTCTTGAGACCGAGCTTCCACCCAGCAAAGTGCATAGAGGTGATCTTGCCCATGGT 826148
Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967
||| || ||||| ||||| | |||||| || ||||||||||| || | |||||
Sbjct 826149 AGGTTCCTTCATGTGGATATTGAGAGACTGAGACTGGTCGATGAAGGCGCCACGATCTGC 826208
Query 70968 AGCCATTTTTATGAT-CGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026
|||||| | | ||| ||| | |||| |||||||| | ||| || || | | || |
Sbjct 826209 AGCCATCTGCAGGATATGTC-TCTGTGAGATTTCCCACACAGTCTTGTAGAGTGCTTTGA 826267
Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083
|||| || || | ||| | | |||||| || ||||| || || || |||||||| |
Sbjct 826268 TATCATCGGGGATGTTGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCT 826327
Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143
| || | || ||| || | ||| | | || | || | ||||| || |
Sbjct 826328 TCATGTTGTCGGACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGA 826387
Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203
|| || || |||| | || | || | ||| || || |||||| || || |
Sbjct 826388 TCTGGAACTCGCCAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGC 826447
Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263
| || || || || | ||| |||| || || |||||||||||||| ||||| | ||
Sbjct 826448 ATTCGTTGTTACCGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGG 826507
Query 71264 TATTTCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATC 71321
|| | || |||||| | || || | | |||| |||| ||||| | |||||||||
Sbjct 826508 AGTTGCGGAGGCCATGT--TGGGCAATCTCAGCTTTGAGAGCATCCCAGTCCCAAAGATC 826565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138780538000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |