Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=4703234
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| |||||||||||||| | | ||| |||| || |||||||| || || |
Sbjct 3808924 TCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 3808865
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653
|| | |||||||| ||| || | | ||||||||| || ||| ||||| | |
Sbjct 3808864 ATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 3808805
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
|| ||||| ||| | ||||| ||||| || ||||| || ||||| ||||| || |
Sbjct 3808804 TCG--ATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGA 3808747
Query 48714 CAAAAATCTGCAT 48726
| || || |||||
Sbjct 3808746 CGAAGATTTGCAT 3808734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250943300050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |