Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 5e-13
>seq3
Length=4703234
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
||| || | || || | ||||||||||| || |||||||| || | ||| ||||||
Sbjct 3808961 TCCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGA 3808902
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
| ||| | || || ||||| || || | ||||| | | ||||| || || ||
Sbjct 3808901 GAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGG 3808842
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCG 94957
|| || || ||||| | || || | ||||||| | ||| ||||| || ||| |||
Sbjct 3808841 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTC-GC-TGGACTCG 3808784
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||| ||||| || || || ||||| || || ||||| |||||
Sbjct 3808783 ACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290919818000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |