Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 192 9e-45 seq3 98.7 2e-16 >seq8 Length=2851179 Score = 192 bits (212), Expect = 9e-45 Identities = 193/248 (78%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||| Sbjct 264948 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 265006 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 265007 TCCGCCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCAGCTATGATCTACGAGGAGA 265066 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| |||| | |||| ||||||| || || |||| ||||| || || || | Sbjct 265067 CGCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGCGATGCGGTCACATACACTG 265126 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||||| | ||| ||||||| || |||| || |||| Sbjct 265127 AGCACGCCAAGCGCAAGACCGTCACCTCTCTCGATGTCGTCTACGCCCTGAAGCGACAAG 265186 Query 16671 GCCGTAAG 16678 | |||||| Sbjct 265187 GACGTAAG 265194 >seq3 Length=4703234 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| ||| || || |||||||| || ||||||||||| ||||| Sbjct 2386204 GCCAAGCGTCACCGCAAGAT-TCTCCGTGACAACATCCAGGGTATCACCAAGCCTGCTAT 2386262 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| || |||||||| || ||||| ||| | |||| Sbjct 2386263 CCGTCGTCTCGCACGTCGTGGCGGTGTCAAACGTATTTCTG 2386303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075154284650