Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
seq1 87.8 2e-12
>seq4
Length=3241893
Score = 91.5 bits (100), Expect = 1e-13
Identities = 192/284 (68%), Gaps = 2/284 (1%)
Strand=Plus/Plus
Query 148598 GGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGC 148657
||| || ||||| | ||||||||| || || |||||| || ||| || ||||||||
Sbjct 827572 GGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGC 827631
Query 148658 ACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTA 148717
|| || ||||| | ||||||||| | || |||||||| | || | | ||| |
Sbjct 827632 GCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAA 827691
Query 148718 GCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGT 148777
||| || |||||||| ||| | | || | || || || || |||||| ||
Sbjct 827692 GCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGT 827751
Query 148778 GAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCAT 148836
||| ||| || || ||| | | || | || || || | |||||||| || ||||
Sbjct 827752 GAAGTACTT-GCTCGACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCAT 827810
Query 148837 GAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCG 148880
| || | | |||||||||||||||||||| || | ||||
Sbjct 827811 GTATGCCGACGGACACACGCATCAGCATGTGTTGTGGACGCTCG 827854
>seq1
Length=5232100
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 120341 GTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGAAAAAATCGTTC 120400
||| |||||| |||||| || ||||| || ||||| ||||| || || || || ||
Sbjct 3073775 GTTGACGATGCCGTCGGATGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTC 3073834
Query 120401 TTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 120460
| || || || | |||||||| |||| || ||| ||||| | |||||||||||| |
Sbjct 3073835 ATCGTCATTGAGCCTCTTGTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGC 3073894
Query 120461 TTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
||||| || | | || ||||||||| ||||||||
Sbjct 3073895 GGTCCAGAAGGAAGCTTCGGCCTTCTTGTACATTTGCCAGA 3073935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662100836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |