Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 226 7e-54 >seq4 Length=3241893 Score = 226 bits (250), Expect = 7e-54 Identities = 1133/1794 (63%), Gaps = 103/1794 (6%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| || || || || || ||| | |||||||| | | || || ||| || || Sbjct 827859 ATTGCCGAGCGTCCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAAGAC 827800 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCA 363559 | ||| || ||||| ||||| || || | || | | ||| ||||| ||||| Sbjct 827799 ATCGATAAGGCAATTGAGACATACAA--TTACATGTCGAGCAAGTACTTCACACACGCTT 827742 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 |||| || | | |||||| || || | || || ||||| || ||||| || | Sbjct 827741 CGCCGACCCTCTTCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATCG 827682 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||||||||| |||| ||||||||| |||| || || | || | Sbjct 827681 ATATGAAGGAGGACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATCT 827622 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 |||| | |||||||| |||||| | ||||| ||||||| || | | || Sbjct 827621 CCAAAACCGCAGGCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCT-AC 827563 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 ||| | || ||| || ||||| || || | || ||||||||||| | ||||| Sbjct 827562 ATTGGTGGAACAAATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAAT 827503 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 || || ||||| || || || || || || ||| ||| |||||||| || || || Sbjct 827502 ACCGCTAGGTATGTTGATCAAGGCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTG 827443 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || ||||| |||| | || ||||| |||||||| || || ||||| Sbjct 827442 GAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAA 827383 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | || || ||||| | || || || | ||| || | |||| || ||||||||| Sbjct 827382 GAAGTTCGCGCTCGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGC 827323 Query 363979 GTGGAGGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 ||| ||| || | | ||| ||||| | ||||| |||||||||| ||||| | || Sbjct 827322 GTGCAGG-AGAACGGCGAGTGGACACTCATGTGCCCGAACGAATGTCCTGGTCTAGCGGA 827264 Query 364038 TGTATGGGGTGACGA----------CTAT-------GT-TGCT----------------- 364062 || | ||||| || |||| || ||| Sbjct 827263 CGTTTATGGTGATGAGTTCGAGGAGCTATACACTTCGTGGGCTATTCCATCCCACTAAGG 827204 Query 364063 -CTATACGAAAAGTATGAATCGGAG----GGAAAG---------GCTCGTAAGACAATTC 364108 || ||| || || | ||| || | ||| | ||| ||||| | | Sbjct 827203 CCTGTACATCAACTAACATTCGCAGATATGAGAAGCAAGGTCGTGGTCGCGAGACAGTCC 827144 Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168 || |||||||| |||| ||||||| | || | || | ||||| |||| || || | Sbjct 827143 GGGCTCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGAAACCCATACA 827084 Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228 || ||||||||||| | ||||| |||||| ||||||| || | || || || | || || Sbjct 827083 TGCTGTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTGGGAACGA-TCCGC 827025 Query 364229 AG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287 || |||||| || || ||||| || | |||||| |||| || ||| || || || Sbjct 827024 AGCTCCAACCTTTGCACAGAGATCATCCAGTACACCTCTCCTGAGGAGGTCGCAGTGTGC 826965 Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA------AGATG----GTACTTTTGA 364337 || || || || | || || || || ||| | ||| |||| || Sbjct 826964 AATCTCGCATCTTTAGCTCTGCCCATGTATGTGGACATTCCTCATGCCGAGTAC----GA 826909 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | |||| | || |||| || | | ||| ||||||| ||||| | || || Sbjct 826908 CTTCCAGAAACTGCATGAGGTTGTTCAGACCGTCACTGTCAATCTCAACAAGATCATTGA 826849 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCC-----GAGC--GTTCTAATATGCGTCATCGCC 364450 ||| |||| || |||| |||||| ||| ||| || || | | Sbjct 826848 TGTCAATCATTACCCGGTTCCGGAAGCCCGCAACAGCAACTTCAAA-------CACAGGC 826796 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTT- 364509 | ||||| || || || || || || || ||||| || | ||| ||| || ||| Sbjct 826795 CCATTGGCCTCGGCGTTCAAGGTCTTGCCGACGTCTTCCTCGCCCTC-CGATTGCCTTTC 826737 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 || || ||||| ||| | || || | | ||||||||||| || || ||| || Sbjct 826736 GAGTCTCCTGAGGCTAGGAAGCTTAACATCCAAATCTTTGAAACCATATACCATGCTGCC 826677 Query 364570 ATGACTGCTTCGTGTGA-TTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628 | || || || || | ||| |||| | | ||| || | ||||| || || Sbjct 826676 CTCACCGCATCATGCAAGCTTGCCAAAGAAC-TTGGACCCTATGAATCCTATGAAGGCTC 826618 Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688 |||| ||||| || | | || | ||| | ||||||||||| || ||| | || Sbjct 826617 CCCTGCCTCGCAAGGCATTCTTCAATATGACATGTGGAATGTCACCCCCACTGATCTTTG 826558 Query 364689 GAACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTCCCT 364742 | |||||||| | || ||| | | ||| | ||||| ||||||||||| Sbjct 826557 GGACTGGGATGCTCT------CAAAGCTGAGATTGCCCAACATGGCCTCCGCAACTCCCT 826504 Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802 | || || ||||| || || ||||| | ||||| ||||| |||||||| ||||| Sbjct 826503 TCTCGTGGCTCCTATGCCGACTGCCTCTACATCTCAGATTCTCGGTAACAACGAATGCTT 826444 Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 || || | ||| ||| | || || ||||| ||||| | || || || | | | || Sbjct 826443 TGAGCCTTATACCTCCAACATCTACTCCCGCCGTGTTCTCGCTGGCGAGTTCCAGATCGT 826384 Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922 ||| | | |||| |||||| |||| || ||||| |||| ||||||||| Sbjct 826383 CAATCCCTGGTTGCTCAAAGATCTTGTCGACATGGGCTTGTGGTCCGACAACATGAAGAA 826324 Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982 |||||||||| ||| ||| | ||| || || | || || ||| | || Sbjct 826323 TAGGATCATCGCCGAAGGTGGCTCTATTCAGCGGATCCCCAACATCCCCGATGATATCAA 826264 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | | ||||| || || |||||||| || | || | || | | ||||| || || Sbjct 826263 AGCACTCTACAAGACTGTGTGGGAAATCTCACAGAGACATATCCTGCAGATGGCTGCAGA 826204 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 ||| || || || ||| ||| ||||| | || | ||||| | || ||| Sbjct 826203 TCGTGGCGCCTTCATCGACCAGTCTCAGTCTCTCAATATCCACATGAAGGAACCTACCAT 826144 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || || ||||| || |||||||| |||||| ||||| || Sbjct 826143 GGGCAAGATCACCTCTATGCACTTTGCTGGGTGGAAGCTCGGTCTCAAGACGGG 826090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352765039100