Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq4 86.0 5e-12 >seq3 Length=4703234 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | ||||| |||| |||||| ||| | Sbjct 3808734 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATTACGCTCGAGGTCGAGTCCAGC 3808793 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| || || || || Sbjct 3808794 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 3808853 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||||| |||||||| | | ||| || |||||| ||| Sbjct 3808854 CAGCGGCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGATTACAAC 3808913 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || ||||| || | || || ||| Sbjct 3808914 ATTCAGAAGGAATCGACCCTGCACTTGGTG 3808943 >seq4 Length=3241893 Score = 86.0 bits (94), Expect = 5e-12 Identities = 179/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 133367 ACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTA 133426 || || || || ||||||||| || ||| || |||||||| || || || || | | Sbjct 827591 ACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTCA 827650 Query 133427 TAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGC 133486 |||||||| | ||||||||| |||| || | || | | || || ||||| || ||| Sbjct 827651 TAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGC 827710 Query 133487 ATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAACAGCTTTGATCG-CAT 133545 | | || | | || | || || |||||| || || ||| | ||| ||| Sbjct 827711 GATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTT-GCTCGACAT 827769 Query 133546 CAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACACG 133605 | |||| | ||||||||| | || |||||||| ||||| || | | ||||| Sbjct 827770 GTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACG 827829 Query 133606 CATCAGCATATGTTGAGGTCGCTC 133629 ||||||||| ||||| || ||||| Sbjct 827830 CATCAGCATGTGTTGTGGACGCTC 827853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935738007750