Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 5e-32
seq1 125 7e-24
seq7 123 2e-23
seq8 93.3 4e-14
>seq3
Length=4703234
Score = 152 bits (168), Expect = 5e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| ||||| || || | |||||| ||||| |||||||||||||||
Sbjct 3808960 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAG 3808901
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || ||||||||||| ||| |||| | |||||||||||||| |||
Sbjct 3808900 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3808841
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || ||| |||||||||
Sbjct 3808840 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 3808781
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || ||||| ||||| || ||||| || |||||
Sbjct 3808780 TCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| ||||| || |||| ||| |||||||| || |||||||| |||
Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || ||||||||||| ||| |||| | |||||| || ||||||||
Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | ||||| | || || |
Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || ||||| | || || ||||| ||||||||
Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 3808049 GCCACCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 3807990
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 3807989 TAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGG 3807930
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||| | | || | || || | |||||| |
Sbjct 3807929 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATTGTGTCAGAGGACTCCAC 3807870
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 3807869 CTCGAGGGTGATGGTCTTGCCGGT 3807846
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| || |||||||| |||
Sbjct 3808276 CCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAT 3808217
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | ||||| || |||||||||
Sbjct 3808216 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGG 3808157
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | ||||| | || || |
Sbjct 3808156 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCACC 3808097
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| || | || || ||||| | || || ||||| |||||||||
Sbjct 3808096 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATG 3808049
>seq1
Length=5232100
Score = 125 bits (138), Expect = 7e-24
Identities = 346/517 (67%), Gaps = 19/517 (4%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAG-CAGCACCGCGAC 46145
|| ||| | |||||||| |||| ||||| ||||| ||||| | | | || | | | ||
Sbjct 3073547 CCCTGCATCCGCAAGAAGGCCGAGTGGGCAATGAAATGGAT-ATCTGACAAGAGCTCCAC 3073489
Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttC--TGGCAGT 46203
||||| |||| | || |||||||| ||| ||||| | |||| ||| |||
Sbjct 3073488 CTTCGCGTCGCGTCTTGTAGCCTTTGCCGCTGTCGAGGG--TATTTTCTTCAGTGGATCC 3073431
Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262
|| || ||||||| | |||| || | || | |||||||||||||||| || ||
Sbjct 3073430 TTCGCGTCCATCTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGCCTGACCTTCTCGAA 3073372
Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322
|| || || || || || |||||| |||| || ||||| || || ||| || |
Sbjct 3073371 TGAACTCATCTCTCGTGATGAGGGCATGCACACCGACTTCGCCTGCCTCCTCTT-----C 3073317
Query 46323 TCGCGTG-CACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGT--TCAAGGAGGCGGT 46379
|| | | || ||| || || || | | ||||| | ||| ||||||||
Sbjct 3073316 TCCCTTCTCAACACACGCCCAAGCAAGAAGGAGGTC-GAGCACATCATCACCGAGGCGGT 3073258
Query 46380 GGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC 46439
|| ||| | ||||| | || | |||||||| || ||||| || |||||| |
Sbjct 3073257 CAAGATCGAGCAAGAGTTCCTCACCGAGGCACTGCCTTGCGCGCTGCTCGGTATGAACTC 3073198
Query 46440 ACAGTCA-ATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498
||| |||||| | ||||||||||| || || ||||| ||||| || || |
Sbjct 3073197 TG-GTCTGATGTGCCAATACATCGAGTTCGTCGCCGACCGCCTGCTATTGTCTCTCGGCA 3073139
Query 46499 AGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGG 46558
| || ||| || |||| ||| || || || || ||| | ||||||||| ||| |
Sbjct 3073138 ATCCCAAGGTTTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCCG 3073079
Query 46559 GCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|||| || || || ||||| ||||||||||| || ||
Sbjct 3073078 GCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 3073042
>seq7
Length=3010262
Score = 123 bits (136), Expect = 2e-23
Identities = 112/140 (80%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061
|||| ||| || |||| ||| || || | ||| | ||||||||||| || |||||||||
Sbjct 2377806 ATGATGCCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAA 2377865
Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121
||||| | ||||| |||||| ||||||||||| ||| |||| | |||||| |||||
Sbjct 2377866 TCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCG 2377925
Query 131122 GGAGGGATTCCTTCTTTGTC 131141
|| ||||| |||||||||||
Sbjct 2377926 GGGGGGATGCCTTCTTTGTC 2377945
>seq8
Length=2851179
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| || || | || | |||||||||||| || |||||||| |||
Sbjct 895292 CCTCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 895233
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || |||||||| || ||| |||| || ||||||||||| || ||
Sbjct 895232 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 895173
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 895172 ATGCCCTCCTTGTC 895159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012504992000
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