Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 203 4e-47
seq1 91.5 2e-13
>seq4
Length=3241893
Score = 203 bits (224), Expect = 4e-47
Identities = 592/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|||||||| || || |||| | | || ||||||||||| | ||| ||||| | | |
Sbjct 827243 TCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGTC 827302
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
||||| |||| |||| ||| || ||||| || || || |||||||| | || ||||
Sbjct 827303 CACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAAT 827362
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
| || | | | | ||| || || || |||||| || || ||||| | | |
Sbjct 827363 AAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAA 827422
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
| || | ||||| || |||| ||| ||||| | | || || |||||||| || ||
Sbjct 827423 ACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCT 827482
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
||||| | || |||||||| || || || || | | ||| || || | ||| || ||
Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 63350
|| ||||| || || || ||| || | |||||||| | ||| ||||
Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATT--CAGAC 827600
Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCC 63409
| || || ||||| |||| ||||| | ||||| ||| || | || ||||||||||||
Sbjct 827601 CAATACCGCCTGCGGTTTTGGAGATCATGGCGCA-CGTCTTCAGTGTGTCATAGATGCCC 827659
Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGT 63468
|| || || || ||| |||| | | || || ||| ||||||||| | ||| ||
Sbjct 827660 TCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGG-GGCGATGGGGT 827718
Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA-TTTTTCAGAAAGTAGATTGT 63527
|||||||| || | ||| || |||||||| || || | || || | ||| |||||
Sbjct 827719 CCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACATGTA-ATTGT 827777
Query 63528 ACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACA 63587
| |||||||| || || || || ||| || || || | |||||||| | ||
Sbjct 827778 ATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGCA 827837
Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63647
|||| || || | || | || |||| |||||| | | ||| || ||| | ||
Sbjct 827838 TGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGAG 827897
Query 63648 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63707
| || ||||| || | | ||| ||||| || ||||| | ||| | |||||||| |
Sbjct 827898 TCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGAGTTGAGAT 827957
Query 63708 TATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATAGGAAAATGTTTC 63766
|| | ||| | || | | | | | || ||||||| || || ||
Sbjct 827958 CGTCAGCGTGTTTCATGACGATGT-CGTAGACCGACTTTGAAATCATCGGCTGGCTCTTG 828016
Query 63767 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63826
||||| || || |||||||| ||| | | || | | || | ||| | |||||
Sbjct 828017 CCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTGCTTTTTG 828076
Query 63827 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
|||| |||||| ||||| || || || || | || || || |||||||| || |||||
Sbjct 828077 GTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTCGGGATG 828135
>seq1
Length=5232100
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| ||||| ||| ||| | ||||| || | | || | ||| || || || || ||
Sbjct 3073327 CAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGG 3073386
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || || ||||| || ||||| || |||||||| || |||||| ||||||
Sbjct 3073387 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAA 3073446
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGT 32837
|| || || || || |||||||| | ||| | | | | || ||| |||| |
Sbjct 3073447 ATACCCTCGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTGGAGCTCTTGTCAGAT 3073506
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
||||| || ||||| |||||||||||
Sbjct 3073507 ATCCATTTCATTGCCCACTCGGCCTTCTT 3073535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631603980000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |