Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 8e-39
seq1 113 8e-20
seq7 104 4e-17
seq8 100 5e-16
seq2 89.7 9e-13
>seq3
Length=4703234
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | ||||||||||| |||||||| || |||||||| || ||||||
Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || ||||| ||||| | ||||| || || |||
Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| || ||||| || | |||||| ||
Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || || || | |||||||||||| ||||||||
Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 158 bits (174), Expect = 2e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || || || || | |||||||| || || || || || || ||||| ||||||||
Sbjct 3808961 TCCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGA 3808902
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | || ||||| | |||||| || ||||| ||||| | || ||||| |||||
Sbjct 3808901 GAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGG 3808842
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTA 68412
||||| |||||||| || ||||| | ||||||| ||||||||||| |||| | || |
Sbjct 3808841 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTC-GCTGGACTCGA 3808783
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | || ||||| || || || || ||||||||||| || |||||
Sbjct 3808782 CCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || ||||| || |||||||| || |||||
Sbjct 3808276 CCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAT 3808217
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| ||||||| ||||| || || ||
Sbjct 3808216 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGG 3808157
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| ||| |||||||| || | |||||| ||
Sbjct 3808156 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCACC 3808097
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || | |||||||||||| ||||||||
Sbjct 3808096 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||||||| || || ||||| || |||||||| || |||
Sbjct 3808732 CCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3808673
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| |||||||| ||||| | ||||| || || ||
Sbjct 3808672 AACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGG 3808613
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||| || || | |||||| ||
Sbjct 3808612 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACC 3808553
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| || || || || ||||||||||| || |||||
Sbjct 3808552 TCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
>seq1
Length=5232100
Score = 113 bits (124), Expect = 8e-20
Identities = 139/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||| | ||||||||| || || || |||||||||||||| |||||| |
Sbjct 3073023 CATGACGCCAGACTTCTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 3073082
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAA 10052
| ||| ||| |||||||||||| |||||||| |||| |||| |||||| |
Sbjct 3073083 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAAAC--CTTGGGATTG 3073140
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| | | | |||||| || |||||||||||||| |||| |||||| | |||
Sbjct 3073141 CCGAGAGACAATAGCAGGCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAG 3073200
Query 10113 TTCATGCC 10120
||||| ||
Sbjct 3073201 TTCATACC 3073208
>seq7
Length=3010262
Score = 104 bits (114), Expect = 4e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| || ||||| ||||| || |||||||| |||||| |
Sbjct 2377812 CCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTG 2377871
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||| | ||||||||||| ||
Sbjct 2377872 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGGG 2377931
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386
|||||||| ||||| || ||||| | |||||
Sbjct 2377932 ATGCCTTCTTTGTCCTGGATCTTGGATTTGAC 2377963
>seq8
Length=2851179
Score = 100 bits (110), Expect = 5e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| || || || | || | ||| || || ||||| || |||||||| || |||||
Sbjct 895293 TCCTCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 895234
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | || ||||| | |||||| |||||||| || | | || ||||| || ||
Sbjct 895233 AAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 895174
Query 68354 AATGCCTTCCTTGTCTTGAA 68373
|||||| |||||||||||||
Sbjct 895173 AATGCCCTCCTTGTCTTGAA 895154
>seq2
Length=5130782
Score = 89.7 bits (98), Expect = 9e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 225410 TTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469
|||| |||||| || || ||| ||| || |||| || || || || ||||| ||
Sbjct 4263950 TTCTGCTCGTAGTGGTAGATATCCGTGCAGACATCGTCGAGAAATCCGGAATCGTGAGAA 4263891
Query 225470 ACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATG-AGCCATGCCACGTT 225528
||||| | | | | | ||| | |||| |||| || || |||||||| |||||
Sbjct 4263890 ACAATCAAGCTGGTGATTTCCGTGTGCTCCTTCAGGTA-GTTCTGCAGCCATGCGACGTT 4263832
Query 225529 GCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGAT 225588
| ||||||| ||| || ||||||||||| ||||||| || || || || || ||
Sbjct 4263831 GGCCACGTCCAAGTGATTAGTAGGTTCGTCGAGAAGCAAGACATCCGCGCGCATTAGCAT 4263772
Query 225589 GGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCC 225636
|| || | | || ||| ||||| ||||| || || ||||| |||||
Sbjct 4263771 AGCTCGAGCCAAAGCCAGTTTCATCTTCCATCCGCCAGACAGAGAGCC 4263724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621823986000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |