Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3 118 9e-22 seq7 95.1 1e-14 >seq3 Length=4703234 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || ||||| | | || || |||| || || || || || |||||||| ||| Sbjct 3808507 ATACCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCG 3808448 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||| || || || || ||| |||||||||||||||| |||||| Sbjct 3808447 GAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGA 3808388 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| ||| || | ||||| Sbjct 3808387 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCA 3808328 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||||| || || || || |||||||| Sbjct 3808327 ACCTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | || ||||| || ||||||||||||||| Sbjct 3808960 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAG 3808901 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||||| || || || || ||| ||||||| ||||| |||||||| || Sbjct 3808900 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3808841 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||||| || | | || | ||||||| |||| ||||| Sbjct 3808840 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 3808781 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || |||||||||||||| || || || || ||||| Sbjct 3808780 TCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || || || || || |||||||| ||| Sbjct 3808735 ATACCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCG 3808676 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| ||| ||||| || || || ||| |||||||||||||||| ||||| Sbjct 3808675 CTCAACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGG 3808616 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | || |||| ||||| Sbjct 3808615 GGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCA 3808556 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || ||||| ||||| Sbjct 3808555 ACCTCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506 >seq7 Length=3010262 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||| || | | || | ||| | ||| || || || || |||||||||||| Sbjct 2377809 ATGCCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 2377868 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | || || || || || || || || ||| ||||||||||||||||||| || Sbjct 2377869 CTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGG 2377928 Query 114273 GGAATGCCTTCTTTGTC 114289 || |||||||||||||| Sbjct 2377929 GGGATGCCTTCTTTGTC 2377945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134143980600