Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 1e-31
seq7 93.3 1e-13
>seq3
Length=4703234
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| ||||| || | || || || ||||| || |||||||
Sbjct 3808276 CCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAT 3808217
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || |||||||| || ||||||||| |||
Sbjct 3808216 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGG 3808157
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| |||||||| || || | ||| ||||| ||
Sbjct 3808156 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCACC 3808097
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||||||||| ||||||| ||||||||||| ||||||||
Sbjct 3808096 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || | || | ||| || || ||||| || ||||||| |
Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | || || || |||||||| |||||||||||| ||
Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || |||| || || || || || | ||| ||||| ||
Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| |||||||| ||||||| ||||||||||| ||||||||
Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 134 bits (148), Expect = 3e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || || || || |||| ||| || || |||||||| | || || || |||||
Sbjct 3808925 TTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 3808866
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || ||||| || |||||| || || || |||||||| |||| || |||||
Sbjct 3808865 GATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 3808806
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||||| || || || |||||||| || ||||| |||||||||||||||||
Sbjct 3808805 GTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGAC 3808746
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 3808745 GAAGATTTGCAT 3808734
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || | |||| || || || ||||| || ||||||
Sbjct 3808732 CCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3808673
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||| || || || || | || ||||| |||||||| |||||||||||| |||
Sbjct 3808672 AACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGG 3808613
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || ||||| || |||| |||| ||||| ||
Sbjct 3808612 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACC 3808553
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct 3808552 TCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | ||| ||||| |||| || || || ||||| || ||||
Sbjct 3808052 CATG-CCACCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGT 3807994
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| || ||||| | || || || |||||||||| ||||| ||
Sbjct 3807993 CGGATAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCG 3807934
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| || | ||||| || || || | || || |
Sbjct 3807933 GCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATTGTGTCAGAGGACT 3807874
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449
| || ||||| ||||| ||||| |||||
Sbjct 3807873 CCACCTCGAGGGTGATGGTCTTGCCGGT 3807846
>seq7
Length=3010262
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/178 (72%), Gaps = 1/178 (1%)
Strand=Plus/Plus
Query 288231 GATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTG 288290
|||| |||| ||| || || || || | ||| || ||||| | ||| || || ||
Sbjct 2377797 GATGGTTCAATGATG-CCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTG 2377855
Query 288291 GATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACG 288350
||| || || ||| ||||||||| ||||| || | || || || |||||||| |||||
Sbjct 2377856 GATGTTGTAATCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACG 2377915
Query 288351 CTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408
|||||| ||||| |||||||| |||||||| || | ||| || || ||| ||
Sbjct 2377916 CTGTTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTGGATTTGACATTATCTGTA 2377973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653644283900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |