Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 seq4 107 2e-18 >seq1 Length=5232100 Score = 113 bits (124), Expect = 5e-20 Identities = 329/501 (66%), Gaps = 12/501 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| ||| ||||| ||| |||||||| Sbjct 3073041 GTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCAT 3073100 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877 || || || ||||| | | ||| ||| | || || | || || || Sbjct 3073101 GAAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAATAGCAGGCG 3073160 Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937 || | |||| |||| ||||| | ||||| ||||||||||||||| || || Sbjct 3073161 GTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGCGCA 3073220 Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG-GCGT 125996 || || || || || |||| | | ||| || | || || || | |||| || Sbjct 3073221 AGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTGCTC 3073280 Query 125997 GAATGGTGTCCACCCCAGG--TCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 126054 || || | || | | ||| | | | || ||| || ||| || || Sbjct 3073281 GACCTCCTTCTTGCTTGGGCGTGTGTTGAGAAGGGAGAAGAGGAGG--CA-GGCGAAGTC 3073337 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 ||| | ||||| ||||| ||||||||||||||||||||| ||| || |||||||| Sbjct 3073338 GGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCATGAG 3073397 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||||| | |||||| || | || || || |||||| || ||||| || Sbjct 3073398 ACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACCCTCGAC 3073457 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCACTT 126231 | || || || | |||||| || |||| | || | ||||| | ||| || Sbjct 3073458 AGCGGCAAAGGCTACAAGACGCGACGCGAAGGTG---GAGCTCTTGTCAGATATCCATTT 3073514 Query 126232 CATCGCCCACTGCGCCTTTTT 126252 ||| ||||||| ||||| || Sbjct 3073515 CATTGCCCACTCGGCCTTCTT 3073535 >seq4 Length=3241893 Score = 107 bits (118), Expect = 2e-18 Identities = 368/565 (65%), Gaps = 13/565 (2%) Strand=Plus/Plus Query 114761 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820 ||||| | ||| | ||| | || ||||| || ||||||||||| ||||| || ||| Sbjct 827288 GGGCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATC 827347 Query 114821 CAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880 || | || | || | || ||| |||| ||||||| | || ||||| || | Sbjct 827348 CACAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGG 827407 Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC---- 114936 || | ||| | | | || |||||||| || |||||||| | || | | || Sbjct 827408 TCAAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGG 827467 Query 114937 CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 | | | | || | || | |||||||| || || || | || |||||||| || Sbjct 827468 CGTTTGTTG-CCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGG 827526 Query 114997 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 115056 |||| ||| | || ||||||||| || | ||| | | | || | || ||| Sbjct 827527 GATGAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCAC-GA-ATC 827584 Query 115057 A--TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 115114 |||| | || ||||||||| ||||| || ||||| |||||| | | || Sbjct 827585 CGGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGT 827644 Query 115115 CTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATT 115174 || | ||||| || ||||| ||| |||| | |||| ||||||||| |||||| Sbjct 827645 GTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATT 827704 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 115233 || ||| ||| || || || ||||||||||| || | ||||| |||| || |||| Sbjct 827705 TGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAA-GTA-CTTGC 827762 Query 115234 -GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCG 115292 ||||| | || ||| ||||| | | |||||||| || || || |||| | Sbjct 827763 TCGACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGG 827822 Query 115293 AGACCCGCATAAACATGTATTGGGG 115317 | || ||||| | ||||| ||| || Sbjct 827823 ACACACGCATCAGCATGTGTTGTGG 827847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353226654000