Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 8e-30
>seq3
Length=4703234
Score = 145 bits (160), Expect = 8e-30
Identities = 164/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| || ||||| ||||| |||||||| | ||||| || |
Sbjct 3808949 ACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCC 3808890
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || ||||| ||||| ||||||||||| | ||| | || ||||||
Sbjct 3808889 GTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTT 3808830
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| || |||| ||| | | | |||||||| || || || |||| ||| |
Sbjct 3808829 GTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAA 3808771
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||| || || ||||| || |||||||||||
Sbjct 3808770 TGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| ||||||||
Sbjct 3808241 CTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 3808182
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||||||||| || || | || | || |||||||||| ||| || || | |||
Sbjct 3808181 GATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCA-CGT 3808123
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | || || |||||||| |||| |||||| || ||||| || | ||||| |
Sbjct 3808122 TGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGA 3808063
Query 42196 CAAAGATTTGCAT 42208
| ||||| |||||
Sbjct 3808062 CGAAGATCTGCAT 3808050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212460492000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |