Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 3e-34
>seq4
Length=3241893
Score = 159 bits (176), Expect = 3e-34
Identities = 436/668 (65%), Gaps = 0/668 (0%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||| | ||||| ||||| || || ||||||||| || | | |
Sbjct 827922 AACTACCAGTTCTTCGGTTTCAAGACTCTTGAACGCTCATACCTCCTCCGCATAAACGAC 827863
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| || ||||||| || || || |||||||||| || || |||| || || ||| |
Sbjct 827862 AAAATTGCCGAGCGTCCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAA 827803
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| || | | | | | || ||||| | |||| | || ||
Sbjct 827802 GACATCGATAAGGCAATTGAGACATACAATTACATGTCGAGCAAGTACTTCACACACGCT 827743
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| |||||||| ||||| ||||||||||| ||| || ||||| || || ||||| ||
Sbjct 827742 TCGCCGACCCTCTTCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATC 827683
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| |||| ||| |||| || || | |||| || ||| || || | |||
Sbjct 827682 GATATGAAGGAGGACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATC 827623
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| ||| ||| || || || || | | ||||||| | ||||| | || |||||
Sbjct 827622 TCCAAAACCGCAGGCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCTAC 827563
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| | || || |||||||| || ||||| ||| |||||||||| || |||| ||||||
Sbjct 827562 ATTGGTGGAACAAATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAAT 827503
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || | || || || || || || | | ||| | || || |||| ||
Sbjct 827502 ACCGCTAGGTATGTTGATCAAGGCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTG 827443
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| ||||| | ||| | ||||| || ||||| || ||||| ||
Sbjct 827442 GAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAA 827383
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | || | ||| | || ||||| | ||| | || ||||| || ||||| |||
Sbjct 827382 GAAGTTCGCGCTCGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGC 827323
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| || | ||| || |||| || | || || || |||||||| || || | |||
Sbjct 827322 GTGCAGGAGAACGGCGAGTGGACACTCATGTGCCCGAACGAATGTCCTGGTCTAGCGGAC 827263
Query 94375 GTTTGTGG 94382
|||| |||
Sbjct 827262 GTTTATGG 827255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722890798000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |