Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 159 3e-34 >seq4 Length=3241893 Score = 159 bits (176), Expect = 3e-34 Identities = 436/668 (65%), Gaps = 0/668 (0%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||| | ||||| ||||| || || ||||||||| || | | | Sbjct 827922 AACTACCAGTTCTTCGGTTTCAAGACTCTTGAACGCTCATACCTCCTCCGCATAAACGAC 827863 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | || ||||||| || || || |||||||||| || || |||| || || ||| | Sbjct 827862 AAAATTGCCGAGCGTCCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAA 827803 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| || | | | | | || ||||| | |||| | || || Sbjct 827802 GACATCGATAAGGCAATTGAGACATACAATTACATGTCGAGCAAGTACTTCACACACGCT 827743 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | |||||||| ||||| ||||||||||| ||| || ||||| || || ||||| || Sbjct 827742 TCGCCGACCCTCTTCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATC 827683 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | |||| ||| |||| || || | |||| || ||| || || | ||| Sbjct 827682 GATATGAAGGAGGACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATC 827623 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || ||| ||| || || || || | | ||||||| | ||||| | || ||||| Sbjct 827622 TCCAAAACCGCAGGCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCTAC 827563 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || | || || |||||||| || ||||| ||| |||||||||| || |||| |||||| Sbjct 827562 ATTGGTGGAACAAATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAAT 827503 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || | || || || || || || | | ||| | || || |||| || Sbjct 827502 ACCGCTAGGTATGTTGATCAAGGCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTG 827443 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || ||||| || ||||| || Sbjct 827442 GAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAA 827383 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | ||| | || ||||| | ||| | || ||||| || ||||| ||| Sbjct 827382 GAAGTTCGCGCTCGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGC 827323 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || | ||| || |||| || | || || || |||||||| || || | ||| Sbjct 827322 GTGCAGGAGAACGGCGAGTGGACACTCATGTGCCCGAACGAATGTCCTGGTCTAGCGGAC 827263 Query 94375 GTTTGTGG 94382 |||| ||| Sbjct 827262 GTTTATGG 827255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722890798000