Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 1e-30
seq4 109 9e-19
>seq1
Length=5232100
Score = 149 bits (164), Expect = 1e-30
Identities = 333/498 (67%), Gaps = 9/498 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| ||| ||| || |||||||| |||| |||||
Sbjct 3073056 CTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATGAAGTCGAAGGGGTT 3073115
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| || ||| ||| ||||||| | |||| | ||| || || || ||
Sbjct 3073116 GGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAATAGCAGGCGGTCGGCGACGAACTC 3073175
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| |||||| | || |||| || || |||||| || || || || |
Sbjct 3073176 GATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGCGCAAGGCAGTGCCTCGGT 3073235
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTACC 159887
|| ||||| | ||| |||| |||||| ||||| | || ||| || | | ||| | |
Sbjct 3073236 GAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTGCTCGACCTCCTTCTTGCT 3073295
Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
||| || | || | | || |||||||| || |||||| ||||| ||
Sbjct 3073296 TGGGCGTGTGTTGAGAAGGGAG------AAGAGGAGGCAGGCGAAGTCGGTGTGCATGCC 3073349
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||| || |||||||||| || || || | | | ||||| ||||||| || ||| ||
Sbjct 3073350 CTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCATGAGACCGCGCTTCTT 3073409
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
|||||| || |||| ||| || | || || || || || ||||| || || ||||| ||
Sbjct 3073410 GAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACCCTCGACAGCGGCAAAGGC 3073469
Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125
|| || | | | || | || | | ||||| |||| | | ||||| || ||
Sbjct 3073470 TACAAGACGCGACGCGAAGGTGGAGCTCTTGTCAGATATCCATTTCATTGCCCACTCGGC 3073529
Query 160126 CTTCTTTGCGATGCACGG 160143
|||||| |||||| ||
Sbjct 3073530 CTTCTTGCGGATGCAGGG 3073547
>seq4
Length=3241893
Score = 109 bits (120), Expect = 9e-19
Identities = 445/687 (65%), Gaps = 12/687 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACG-GCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| ||| || |||||||| |||| | || || | | | ||| || ||||||||||
Sbjct 826032 CTGGTCGACAGTGAACTGGATGG-GAGCAGAAGCCGCCATCGTTCGAAGGTAGTACATGC 826090
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || || || |||||| | |||||| || | | |||| || | | |
Sbjct 826091 CCGTCTTGAGACCGAGCTTCCACCCAGCAAAGTGCATAGAGGTGATCTTGCCCATGGTAG 826150
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||| || || |||||||| ||||||||| |||||||| ||||||||
Sbjct 826151 GTTCCTTCATGTGGATATTGAGAGACTGAGACTGGTCGATG-AAGGCGCCACGATCTGCA 826209
Query 204017 GCCATATTGATAAT-GGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
||||| | | || ||| |||| || || |||||||| |||||| | | || || |
Sbjct 826210 GCCATCTGCAGGATATGTC-TCTGTGAGATTTCCCACACAGTCTTGTAGAGTGCTTTGAT 826268
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
| | || | | | | ||| || ||||| ||||| || | || ||
Sbjct 826269 ATCATCGGGGATGT-TGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCT 826327
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| | | || ||||| ||||| || || || | || ||| |||| ||
Sbjct 826328 TCATGTTGTCGGACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGA 826387
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
|||| || || || | || || | |||| | | | |||| ||| | || || ||
Sbjct 826388 TCTGGAACTCGCCAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGC 826447
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
|||||||| |||| |||||||| || ||| || ||||| ||||||| ||| ||||
Sbjct 826448 ATTCGTTGTTACCGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGG 826507
Query 204315 AGTTGCGCACACCGTATTTTTGG-ACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGC 204372
||||||| | || || || || | || || || |||| |||||| | |
Sbjct 826508 AGTTGCGGAGGCC--ATGTTGGGCAATCTCAGCTTTGAGAGCATCCCAGTCCCAAAGATC 826565
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
| |||| | || ||||||||| | |||| |||||||| | | ||| ||| |
Sbjct 826566 AGTGGGGGTGACATTCCACATGTCATATTGAAGAATGCCTTGCGAGGCAGGGGAGCCTTC 826625
Query 204433 GTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492
|| | ||| || | |||| || |||||||| || |||| | ||| ||
Sbjct 826626 ATAGGATTCATAGGGTCCAAGTTCTTTGGCAAGCTTGCATGATGCGGTGAGGGCAGCATG 826685
Query 204493 GTACATGGTCTCAAAGATCTGAACGTT 204519
||| ||||| |||||||| || | |||
Sbjct 826686 GTATATGGTTTCAAAGATTTGGATGTT 826712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154703028000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |