Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq4 109 9e-19 >seq1 Length=5232100 Score = 149 bits (164), Expect = 1e-30 Identities = 333/498 (67%), Gaps = 9/498 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| ||| ||| || |||||||| |||| ||||| Sbjct 3073056 CTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATGAAGTCGAAGGGGTT 3073115 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| || ||| ||| ||||||| | |||| | ||| || || || || Sbjct 3073116 GGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAATAGCAGGCGGTCGGCGACGAACTC 3073175 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| |||||| | || |||| || || |||||| || || || || | Sbjct 3073176 GATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGCGCAAGGCAGTGCCTCGGT 3073235 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTACC 159887 || ||||| | ||| |||| |||||| ||||| | || ||| || | | ||| | | Sbjct 3073236 GAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTGCTCGACCTCCTTCTTGCT 3073295 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || | || | | || |||||||| || |||||| ||||| || Sbjct 3073296 TGGGCGTGTGTTGAGAAGGGAG------AAGAGGAGGCAGGCGAAGTCGGTGTGCATGCC 3073349 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || |||||||||| || || || | | | ||||| ||||||| || ||| || Sbjct 3073350 CTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCATGAGACCGCGCTTCTT 3073409 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| ||| || | || || || || || ||||| || || ||||| || Sbjct 3073410 GAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACCCTCGACAGCGGCAAAGGC 3073469 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 || || | | | || | || | | ||||| |||| | | ||||| || || Sbjct 3073470 TACAAGACGCGACGCGAAGGTGGAGCTCTTGTCAGATATCCATTTCATTGCCCACTCGGC 3073529 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 3073530 CTTCTTGCGGATGCAGGG 3073547 >seq4 Length=3241893 Score = 109 bits (120), Expect = 9e-19 Identities = 445/687 (65%), Gaps = 12/687 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACG-GCAGGCCTGCTTCTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | || || | | | ||| || |||||||||| Sbjct 826032 CTGGTCGACAGTGAACTGGATGG-GAGCAGAAGCCGCCATCGTTCGAAGGTAGTACATGC 826090 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || || || |||||| | |||||| || | | |||| || | | | Sbjct 826091 CCGTCTTGAGACCGAGCTTCCACCCAGCAAAGTGCATAGAGGTGATCTTGCCCATGGTAG 826150 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || |||||| || || |||||||| ||||||||| |||||||| |||||||| Sbjct 826151 GTTCCTTCATGTGGATATTGAGAGACTGAGACTGGTCGATG-AAGGCGCCACGATCTGCA 826209 Query 204017 GCCATATTGATAAT-GGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 ||||| | | || ||| |||| || || |||||||| |||||| | | || || | Sbjct 826210 GCCATCTGCAGGATATGTC-TCTGTGAGATTTCCCACACAGTCTTGTAGAGTGCTTTGAT 826268 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | || | | | | ||| || ||||| ||||| || | || || Sbjct 826269 ATCATCGGGGATGT-TGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCT 826327 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | | || ||||| ||||| || || || | || ||| |||| || Sbjct 826328 TCATGTTGTCGGACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGA 826387 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 |||| || || || | || || | |||| | | | |||| ||| | || || || Sbjct 826388 TCTGGAACTCGCCAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGC 826447 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 |||||||| |||| |||||||| || ||| || ||||| ||||||| ||| |||| Sbjct 826448 ATTCGTTGTTACCGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGG 826507 Query 204315 AGTTGCGCACACCGTATTTTTGG-ACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGC 204372 ||||||| | || || || || | || || || |||| |||||| | | Sbjct 826508 AGTTGCGGAGGCC--ATGTTGGGCAATCTCAGCTTTGAGAGCATCCCAGTCCCAAAGATC 826565 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432 | |||| | || ||||||||| | |||| |||||||| | | ||| ||| | Sbjct 826566 AGTGGGGGTGACATTCCACATGTCATATTGAAGAATGCCTTGCGAGGCAGGGGAGCCTTC 826625 Query 204433 GTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492 || | ||| || | |||| || |||||||| || |||| | ||| || Sbjct 826626 ATAGGATTCATAGGGTCCAAGTTCTTTGGCAAGCTTGCATGATGCGGTGAGGGCAGCATG 826685 Query 204493 GTACATGGTCTCAAAGATCTGAACGTT 204519 ||| ||||| |||||||| || | ||| Sbjct 826686 GTATATGGTTTCAAAGATTTGGATGTT 826712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154703028000