Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 9e-30
seq8 107 2e-18
seq7 91.5 2e-13
>seq3
Length=4703234
Score = 145 bits (160), Expect = 9e-30
Identities = 149/192 (78%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| || || ||||| ||||| ||||| || |||| |||||||||||||| |||||
Sbjct 3808924 TCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 3808865
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | ||||||||||| | || | || |||||||||| ||||||| ||||| |||
Sbjct 3808864 ATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGTT 3808806
Query 46523 GCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||||| || || || || | ||| ||||| ||||| ||||| || || ||
Sbjct 3808805 GTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGAC 3808746
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 3808745 GAAGATTTGCAT 3808734
Score = 129 bits (142), Expect = 7e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| || || | |||| |||||| ||||| |||||||||||||| ||||| | || |||
Sbjct 3808258 ACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCG 3808199
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| || | ||||| || || | || | || |||||||||| |
Sbjct 3808198 AGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGG 3808139
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||| | ||| | | | || || |||||||| || | |||||| || ||
Sbjct 3808138 ATCTTCGACTTCA-CGTTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTT 3808080
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||| || || || ||||| |||||
Sbjct 3808079 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
Score = 127 bits (140), Expect = 2e-24
Identities = 129/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||||||| ||||| | || || |||||||||||||||||
Sbjct 3808013 CTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 3807954
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||||||||||||||| | ||| | || |||||||||| |||||| ||| | |
Sbjct 3807953 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATT 3807894
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | ||||| || ||||| || | |||||||| ||||| ||
Sbjct 3807893 GTCGATTGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 3807846
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| ||||| || |||| |||||||||||||| |||||
Sbjct 3808469 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 3808410
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||| || || | || | || |||||||||| |||||| ||||| |
Sbjct 3808409 GATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 3808350
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || ||||| || || | ||| || || ||||| |||| || || ||
Sbjct 3808349 GTCAATGGTATCCGATGATTCAACCTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGAC 3808290
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 3808289 GAAGATCTGCAT 3808278
>seq8
Length=2851179
Score = 107 bits (118), Expect = 2e-18
Identities = 83/99 (84%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||| ||||||||
Sbjct 895257 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAA 895198
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
||||||||||||||||| | || | || |||||||||
Sbjct 895197 GATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 895159
>seq7
Length=3010262
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||||| || |||||| ||||| ||||| ||| || ||||| |||| |||
Sbjct 2377830 ACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTGAGCGTGCGGCCGTCCTCG 2377889
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| || | ||||| ||||||| || | || || |||||| |
Sbjct 2377890 AGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGGGATGCCTTCTTTGTCCTGG 2377949
Query 46505 ATCTT 46509
|||||
Sbjct 2377950 ATCTT 2377954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238046726000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |