Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 107 8e-18 >seq3 Length=4703234 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || || ||||| || || ||||||||||| Sbjct 3808278 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTTGAATCATCG 3808337 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || ||||| || ||||| || |||||||| |||||| Sbjct 3808338 GATACCATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCAA 3808397 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || ||||| || ||||| | | || || || Sbjct 3808398 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGACTACAAC 3808457 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 3808458 ATCCAGAAGGAGTCCACCCTACACTTGGT 3808486 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || || ||||| ||||| ||||||||||| Sbjct 3808506 ATGCAAATTTTCGTCAAGACGCTTACCGGCAAGACCATTACGCTTGAGGTTGAATCATCC 3808565 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | || || || || || ||||| || || || || |||||| Sbjct 3808566 GATACTATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAA 3808625 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || ||||| ||||| | || ||| || || || Sbjct 3808626 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGTACGTTGAGCGACTACAAC 3808685 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| |||| |||||||| || Sbjct 3808686 ATCCAGAAGGAGTCAACCCTTCACTTGGT 3808714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717134305400