Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3 228 1e-54
seq4 95.1 2e-14
>seq3
Length=4703234
Score = 228 bits (252), Expect = 1e-54
Identities = 461/676 (68%), Gaps = 11/676 (2%)
Strand=Plus/Plus
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
||| | |||| |||||||| ||||| || || | |||||| | |||| |
Sbjct 4305291 AAAAACCTTT-TTATGTTTGCGTTTGAATTCCATTGTGAAGTGGTTCACAAGTCGGTTGT 4305349
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||| || || || ||||| || || || || ||||| | ||||| || ||||| ||
Sbjct 4305350 CGAAGTCCTCGCCGCCCAAATGAGTGTCGCCGGCGGTGGACTTGACCTCGAAGATGCCCT 4305409
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || ||| | | || ||| || || || || || || || ||||| || ||||| ||||
Sbjct 4305410 CCTCGATGGTCAGCAGCGACACGTCGAAGGTGCCGCCGCCGAGGTCGAAGATGAGCACGT 4305469
Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
| ||| || | | ||||| ||||| ||||| || || || || || || || || |
Sbjct 4305470 TGCGCTCGCCGACCTGCTTCTTGTCGAGGCCGTAGGCAATGGCGGCGGCGGTCGGCTCGT 4305529
Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAAT-AGTTGCCG-CATCTTTCGTCGCTTGTCG 7695
| || || || || ||||||||| || || || |||| | || || || || || ||
Sbjct 4305530 TGATGATGCGCAGCACGTTCAGGCCCGCGATCAG--GCCGGCGTCCTTGGTGGCCTGGCG 4305587
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| ||||| |||||||||||||| || ||||| |||| |||| | || ||
Sbjct 4305588 CTGCGAGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTTGTTGACGGTGCCGCCCAG 4305647
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
||||| || ||| | || ||| ||||| || ||||| || || ||||| || | |
Sbjct 4305648 GTACGACTCGGCGGTCTCGCGCATCTTGGTCAGGACCATGGACGAGATCTCCTCGGGGGT 4305707
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
||| ||| || || || || || || | |||| ||| || |||| | |
Sbjct 4305708 GAACGTCTTCTGCTCGCCCTTGAACTCGACCTGGATCACGGGCTT-GCCGC--CCTTGTC 4305764
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
||| ||||| ||| | | ||||| ||| | ||||||| ||| | ||||| |
Sbjct 4305765 GATGACCTTGAACGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGGCGAACTTGCG 4305824
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
||||| || ||||| || || || || ||||| |||||||||||| ||||||||
Sbjct 4305825 GCCGATGAGGCGCTTGGCGTCGAAGACGGTGTTGGCGGGGTTCATGGCGACCTGGTTCTT 4305884
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
||||| ||| ||||| || || || | || || || || ||| | || ||||| ||
Sbjct 4305885 CGCCGAGTCGCCGATCAGGCGCTC---CGTGTCGGTGAAGGCCACGAAGGACGGGGTGGT 4305941
Query 8056 TCGATTCCCTTGGTCG 8071
|| || || ||||||
Sbjct 4305942 GCGGTTGCCCTGGTCG 4305957
Score = 215 bits (238), Expect = 7e-51
Identities = 378/543 (70%), Gaps = 17/543 (3%)
Strand=Plus/Minus
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
||||| ||||| |||||||| ||| | | |||||| | || ||| | | ||||||
Sbjct 1808350 TCCTCGAAACGAGCACGGGTGATGTTGGAGTTGAAATCCTCACCATCGAAGAGCGAATCG 1808291
Query 7307 ATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364
|| |||| || ||||| | ||| | || | ||||||||| || ||||| || || |
Sbjct 1808290 ATCTCAACAGTGGTTTGCGTAGCGTTG--GAAAGCGTTCGCTTAGCACGCTCGCAAGCGG 1808233
Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT-TA 7423
| || | |||||| ||||| || | | || || | ||| ||||| || | | | |
Sbjct 1808232 TCCGGAGACGACGGAGGGCTCGGGCATCGCCTGAGAGATCCTTCTTC-GTCTTCTTGGTG 1808174
Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483
||||| | |||||| ||| || | | ||||||||||| |||||||||||| ||
Sbjct 1808173 AACTCCTTCTTGAAGTGATCAAGCAGATTGGTATCGAAATCTTGACCACCCAAGTGGGTG 1808114
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || ||||| || || || |||| |||||| | ||||| | || || |||||
Sbjct 1808113 TCACCAGCGGTGGCCTTCACGGTGAAGACACCTCCCTGAATGTGCAGCAGGGACACATCG 1808054
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTGTTCTT--- 7599
|| || |||||||||| ||| | ||||| || ||| || || | || | |||
Sbjct 1808053 AAAGTGCCACCACCCAAGTCGTAGATGAGAACATTC----CGCTCCTTTTCGGACTTTCC 1807998
Query 7600 --ATC-GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| |||||| || |||||||| || ||||| || || || ||||| || || |||
Sbjct 1807997 GGATCCGAGACCATAGGCGATAGCGGCGGCCGTGGGCTCGTTGATAATGCGGAGGACGTT 1807938
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
||||||||||| | | ||||| || || |||||||| || ||||| ||||||||
Sbjct 1807937 GAGGCCAGCAATGGCACCAGCATCCTTGGTGGCTTGTCGCTGGTTGTCGTTGAAGTAGGC 1807878
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776
||||| || | ||| || | | ||| ||| | ||||| | || |||| |||||
Sbjct 1807877 AGGGACGGTGATGACGGCCTTCTCGACCTTCATGCCGAGCTTGACCTCAGCGACCTCTTT 1807818
Query 7777 CAT 7779
|||
Sbjct 1807817 CAT 1807815
>seq4
Length=3241893
Score = 95.1 bits (104), Expect = 2e-14
Identities = 274/420 (65%), Gaps = 5/420 (1%)
Strand=Plus/Plus
Query 105562 ACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCC 105621
||||| |||||||||| || |||||||||| || |||| | ||| ||| | |
Sbjct 827321 ACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAATAAGTCACGAGCGCGAACT 827380
Query 105622 TCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGT 105681
||||| | || |||||| || | || || || ||| || ||||||||||||||
Sbjct 827381 TCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTGCCATGGC 827440
Query 105682 TCTAAATAGACTGCAATAGACCCT----TTACGACGCCCCGCTTGATTGACATATCTTGC 105737
|| | |||| |||| | ||| | | ||| | |||||| ||||| || ||
Sbjct 827441 TCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGC-CTTGATCAACATACCTAGC 827499
Query 105738 GGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACG 105797
||| ||| || || || | ||| || || | ||| | || || |||||||||||||
Sbjct 827500 GGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTGTTCCACC 827559
Query 105798 AATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT 105857
||| | | | ||||| | ||| || | | |||||||| || || ||
Sbjct 827560 AATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTGCGGTTTT 827619
Query 105858 ACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATT 105917
||| || ||| || | ||| || || || || ||||| || || ||||| |
Sbjct 827620 GGAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCAT 827679
Query 105918 CGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977
| || ||||| || || |||||||| || || || || |||||||| || || ||
Sbjct 827680 ATCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGG 827739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132403042000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |